Gene Information

Name : Shew_0417 (Shew_0417)
Accession : YP_001092548.1
Strain : Shewanella loihica PV-4
Genome accession: NC_009092
Putative virulence/resistance : Resistance
Product : ArsR family transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG0640
EC number : -
Position : 471407 - 471754 bp
Length : 348 bp
Strand : +
Note : PFAM: regulatory protein, ArsR; KEGG: she:Shewmr4_0532 transcriptional regulator, ArsR family

DNA sequence : 
ATGGCTGTAGCAATCTTTAAAGCCCTGTCCGATGAGACCCGTCTGCTGAGCCTGCTGCTGATCCAGGCCGAGGGCGAGCT
GTGTGTGTGCGAATTGATGGTGGCGCTGGACGAGAGTCAGCCCAAGGTCTCGCGTCATCTGGCGCAGCTACGCAAGGCGG
AACTGCTCAGCGATCGCCGCCAGGGCCAGTGGGTGTTCTACCGTATTAACCCTGAGCTGCCCGACTGGGCGGGCGAGGTG
ATCCAAAAGACGCTGGCGGGCAACCCTCAGCTGTTGAGTCAGGCCCAGGCCAGGTTGGCCAAGATGGGTCAGCGCCCCGA
GCGGGTGCAAGTCTGCTGTAAGGGATAA

Protein sequence : 
MAVAIFKALSDETRLLSLLLIQAEGELCVCELMVALDESQPKVSRHLAQLRKAELLSDRRQGQWVFYRINPELPDWAGEV
IQKTLAGNPQLLSQAQARLAKMGQRPERVQVCCKG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
arsR AFC76435.1 ArsR Not tested AbaR5 Protein 3e-18 50
arsR CAJ77018.1 arsenite inducible repressor Not tested AbaR1 Protein 2e-18 50
arsR2 YP_001007630.1 DNA-binding transcriptional repressor ArsR Not tested YAPI Protein 2e-19 45

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Shew_0417 YP_001092548.1 ArsR family transcriptional regulator BAC0591 Protein 7e-19 57
Shew_0417 YP_001092548.1 ArsR family transcriptional regulator BAC0588 Protein 2e-18 56
Shew_0417 YP_001092548.1 ArsR family transcriptional regulator BAC0589 Protein 9e-20 46
Shew_0417 YP_001092548.1 ArsR family transcriptional regulator BAC0594 Protein 2e-19 44