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Name : Shew_3862 (Shew_3862) Accession : YP_001095984.1 Strain : Shewanella loihica PV-4 Genome accession: NC_009092 Putative virulence/resistance : Unknown Product : resolvase domain-containing protein Function : - COG functional category : L : Replication, recombination and repair COG ID : COG1961 EC number : - Position : 4593900 - 4594484 bp Length : 585 bp Strand : + Note : PFAM: Resolvase, N-terminal domain; Resolvase helix-turn-helix domain protein; KEGG: rha:RHA1_ro03159 resolvase DNA sequence : ATGAATCAAAAGATTGGCTATGCCAGAGTTTCAACCGACGATCAAAACCTGCATTTGCAGAGAGGTGCGTTGGCTGCTGC TGGTTGCGAGATCATTTACGAGGACAAGGCCAGTGGGAAGAATGCCGCTAGACCCGAACTTGATAACTGCTTAAAGGCTC TTAGACCAGGGGATACGTTGGTCGTTTGGAGGCTAGATAGGTTAGGTCGTAGTTTGGCAGACCTAGTGAACGTTGTTACC CATCTGGTTGATGAGCGACGGGTTGGATTTTTGAGCCTACAAGAACAGATTGAAACGAACAGTGCTTCTGGAAAGCTGGT TTTTCATGTGTTTGCTGCTTTGGCTGAATTTGAGCGAAATTTGATTAGCGAACGTACCAAGGCGGGATTGGAAGCCGCAA GAGCTCGCGGGCGCTTGGGTGGGCGGAAGCCAAAGTTACAGAAAAAAGATATCAGGGAGATTAGGGCATTACTCAAAGAT GGTTCTATTCCTGTATCTGATGTTGCTAGGCGATATGGTGTATCTAGAACGACTATTTATAATCATGTAGGGGTGGTGAG TGTACAAAATTCTAGAGGGGATTAA Protein sequence : MNQKIGYARVSTDDQNLHLQRGALAAAGCEIIYEDKASGKNAARPELDNCLKALRPGDTLVVWRLDRLGRSLADLVNVVT HLVDERRVGFLSLQEQIETNSASGKLVFHVFAALAEFERNLISERTKAGLEAARARGRLGGRKPKLQKKDIREIRALLKD GSIPVSDVARRYGVSRTTIYNHVGVVSVQNSRGD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| res | AGF35059.1 | resolvase | Not tested | SGI1 | Protein | 6e-72 | 99 |
| res | AGK06929.1 | resolvase | Not tested | SGI1 | Protein | 6e-72 | 99 |
| res | AGK06966.1 | resolvase | Not tested | SGI1 | Protein | 6e-72 | 99 |
| res | AGK07012.1 | resolvase | Not tested | SGI1 | Protein | 6e-72 | 99 |
| res | AGK07070.1 | resolvase | Not tested | SGI1 | Protein | 6e-72 | 99 |
| res | AAK02044.1 | resolvase | Not tested | SGI1 | Protein | 6e-72 | 99 |
| tnpR | ACD85600.1 | TnpR resolvase | Not tested | SGI2 | Protein | 6e-72 | 99 |
| res | AGF34985.1 | resolvase | Not tested | SGI1 | Protein | 6e-72 | 99 |
| res | AGF35025.1 | resolvase | Not tested | SGI1 | Protein | 6e-72 | 99 |
| 1_318 | CAJ77076.1 | Resolvase | Not tested | AbaR1 | Protein | 2e-30 | 55 |
| ABTW07_3871 | YP_005797119.1 | resolvase IS26 | Not tested | AbaR4e | Protein | 2e-30 | 55 |
| tnpR | ACN81015.1 | TnpR resolvase | Not tested | AbaR5 | Protein | 2e-30 | 55 |
| SH1761 | YP_253676.1 | DNA-invertase | Not tested | ¥ÕSh1 | Protein | 3e-31 | 54 |
| binL | YP_254524.1 | DNA-invertase | Not tested | ¥ðSh2 | Protein | 3e-31 | 54 |
| CDBH8_0918 | YP_005160010.1 | transposase-like protein | Not tested | Not named | Protein | 7e-29 | 53 |
| binR | YP_254224.1 | resolvase/integrase BinR | Not tested | ¥ðSh1 | Protein | 7e-32 | 52 |
