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Name : Shew_3838 (Shew_3838) Accession : YP_001095960.1 Strain : Shewanella loihica PV-4 Genome accession: NC_009092 Putative virulence/resistance : Unknown Product : transposase, IS4 family protein Function : - COG functional category : L : Replication, recombination and repair COG ID : COG3039 EC number : - Position : 4566687 - 4567667 bp Length : 981 bp Strand : - Note : PFAM: transposase, IS4 family protein; KEGG: vch:VCA0472 IS5 transposase DNA sequence : ATGAGCCAACAACTAACCTTTGCCGATAGTGAGTTTTCTAGCAAGCGTCGTCAGACTCGCAAAGAGATTTTTTTATCCCG GATGGAGAACCTGTTGCCGTGGTCTCAACTGCTGGACGTGATTGAACCCTTTTACCCCAAAGTCGGCAACGGTCGCCGTC CTTATCCACTTGAGACAATGTTCCGCATTCATTGTATGCAGCAATGGTACAGTCTTAGTGACGAAGCGACCGAAGATGCG TTATACGAAATTGCTTCAATGCGTCAGTTTGCACTATTGTCACTCGATAAAGCGATCCCAGACCGTACCACCATCATGAA CTTTAGGCACTTGCTGGAAAAGCATAAACTCACACGAAAATTATTCAAAACTGTTAATCAATGGCTGTCGGATAGTGGTG TGATGATGACACAAGGTACGTTGGTGGATGCTACGATTATTGAAGCACCGAGCTCCACTAAGAATAAAAACAATGAGCGA GACCCAGATATGCATCAGACCAAGAAAGGCAACCAATGGCACTTCGGCATGAAAGCCTACATTGGTGTGGATGCCAAGAG CGGTCTCACCCATACGCTGGTTACCACAGCTGCCAACGAACATGATCTGAACCAATTAGATAATTTGCTTCACGGTGAAG AGGAATTCGTTTCCGGCGATGCCGGTTATCAAGGCGCACAGAAACGGGAAGAATTGAAAGACACGAACGTGGAATGGCTG ATTGCCGAGCGCCCCGGTAAAATCCGGGCACTGAAAAAGCGCCCACGCAAGAACAAGACAATAATCAACATCGAATACTT AAAAGCCAGCATCCGAGCAAAGGTAGAACACCCGTTTCGCATTATCAAATGTCAGTTCGGCTTCATCAAAGCACGCTACA AGGGGCTGATGAAAAATGACTCACAGTTAGCCATGTTATTCACTTTGGCAAACCTGTTTACAGTAGACCAAATGTTGCGA CGACAACCAAGATCTGTCTGA Protein sequence : MSQQLTFADSEFSSKRRQTRKEIFLSRMENLLPWSQLLDVIEPFYPKVGNGRRPYPLETMFRIHCMQQWYSLSDEATEDA LYEIASMRQFALLSLDKAIPDRTTIMNFRHLLEKHKLTRKLFKTVNQWLSDSGVMMTQGTLVDATIIEAPSSTKNKNNER DPDMHQTKKGNQWHFGMKAYIGVDAKSGLTHTLVTTAANEHDLNQLDNLLHGEEEFVSGDAGYQGAQKREELKDTNVEWL IAERPGKIRALKKRPRKNKTIINIEYLKASIRAKVEHPFRIIKCQFGFIKARYKGLMKNDSQLAMLFTLANLFTVDQMLR RQPRSV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| PSPTO_1407 | YP_003355052.1 | ISPssy transposase or derivative | Not tested | Hrp PAI | Protein | 1e-67 | 58 |
| tnpA | AAF71487.1 | TnpA | Not tested | Hrp PAI | Protein | 8e-68 | 58 |
| tnp-33 | AAN62255.1 | transposase | Not tested | PAGI-3(SG) | Protein | 2e-82 | 55 |
| tnpA | ACF06175.1 | putative transposase | Not tested | Tn5036-like | Protein | 5e-80 | 54 |
| tnpA | ACF06178.1 | putative transposase | Not tested | Tn5036-like | Protein | 5e-80 | 54 |
| unnamed | AAO33449.1 | putative transposase | Not tested | Not named | Protein | 7e-61 | 53 |
