|
Name : hslU (Shew_0374) Accession : YP_001092505.1 Strain : Shewanella loihica PV-4 Genome accession: NC_009092 Putative virulence/resistance : Unknown Product : ATP-dependent protease ATP-binding subunit HslU Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG1220 EC number : - Position : 421123 - 422448 bp Length : 1326 bp Strand : - Note : heat shock protein involved in degradation of misfolded proteins DNA sequence : ATGTCTGAGATGACTCCACGCGAGATTGTTCACGAGCTGGACAGCCACATCATAGGCCAGCAAAACGCCAAGCGTTCGGT CGCTATCGCCCTGCGTAACCGCTGGCGTCGTATGCAGCTAGATGCCGCGCTGCGCCAAGAAGTCACCCCAAAAAACATTC TGATGATAGGCCCTACGGGTGTAGGTAAGACAGAGATCGCCCGCCGTCTGGCCAAGCTGGCCAAGGCGCCTTTCATCAAG GTCGAAGCCACTAAGTTTACCGAAGTCGGTTACGTGGGTAAGGAGGTCGAGCAGATCATCCGTGACCTCACCGACGCCGC CGTCAAGCTGACCCGCGAAGAGCAGATGGCCAAGTGTAAGTTCAGAGCCGAAGAAGCGGCCGAAGAGCGTATTCTCGATG CCCTACTACCTAAACCCAAGGAAGACTGGGACACTGAGAAGAAAGATGACACCGGCACCCGTCAGGTGTTTCGCAAGAAG CTACGCGAAGGCCAGCTGGACGACAAAGAGATCGAGATCGATATCGCCGCGCCTCAGGTGGGCATAGAGATCATGTCGCC ACCCGGCATGGAAGAGATGACCAGCCAGCTGCAGAGCATGTTCCAAAACATGGGCCCTGGCGCCAGCAAGCGTCGTAAGA TGACCATCAAGGAAGCCTATAAGCTATTGATCGAAGAGGAAGCCGCCAAGCTGGTGAATCCTGACGATCTTAAAGAGCAG GCGATCGAACTGGTCGAGCAACACGGCATCGTCTTCCTAGATGAGATCGACAAGATCTGTAAGCGTGGCGACACCTCGGG GCCAGACGTCTCTCGCGAAGGGGTTCAACGCGACTTACTGCCTCTGGTGGAAGGCTGCACGGTCAACACCAAGCACGGCA TGGTCAAGACAGACCATATCCTGTTTATCGCCTCGGGCGCGTTCCAGATGTCTAAGCCATCGGATCTCATCCCCGAGCTG CAGGGCCGTCTACCGATCCGCGTCGAGCTGGAAGCCCTGTCTGCCAACGACTTTAAGCGCATTCTCACCGAGCCCCATGC CTCGCTCACCGAGCAGTATGTGGCATTGATGGCCACCGAAGGCGTTAAGGTCGAGTTTAGCGAGTCGGGTATCGAGCGCA TCGCTCAGGCTGCCTGGCAGGTCAACGAGCGCACCGAAAATATCGGTGCCCGCCGCCTGCATACCGTGATGGAGCGCCTG ATGGAAGATCTCTCCTTCGAGGCCTCGGACAAGTCAGGCAGCACGACTGTGATCGATGCCGACTATGTTAACGCTCACCT GGAGAACTTGGTACAGGACGAAGATCTCAGCCGCTTCATCCTGTAA Protein sequence : MSEMTPREIVHELDSHIIGQQNAKRSVAIALRNRWRRMQLDAALRQEVTPKNILMIGPTGVGKTEIARRLAKLAKAPFIK VEATKFTEVGYVGKEVEQIIRDLTDAAVKLTREEQMAKCKFRAEEAAEERILDALLPKPKEDWDTEKKDDTGTRQVFRKK LREGQLDDKEIEIDIAAPQVGIEIMSPPGMEEMTSQLQSMFQNMGPGASKRRKMTIKEAYKLLIEEEAAKLVNPDDLKEQ AIELVEQHGIVFLDEIDKICKRGDTSGPDVSREGVQRDLLPLVEGCTVNTKHGMVKTDHILFIASGAFQMSKPSDLIPEL QGRLPIRVELEALSANDFKRILTEPHASLTEQYVALMATEGVKVEFSESGIERIAQAAWQVNERTENIGARRLHTVMERL MEDLSFEASDKSGSTTVIDADYVNAHLENLVQDEDLSRFIL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hslU | YP_003728753.1 | heat shock protein HslU | Not tested | cag PAI | Protein | 5e-96 | 48 |
