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Name : Shew_3634 (Shew_3634) Accession : YP_001095759.1 Strain : Shewanella loihica PV-4 Genome accession: NC_009092 Putative virulence/resistance : Unknown Product : RNA-binding S1 domain-containing protein Function : - COG functional category : K : Transcription COG ID : COG2183 EC number : - Position : 4332191 - 4334554 bp Length : 2364 bp Strand : - Note : PFAM: RNA binding S1 domain protein; SMART: Resolvase, RNase H domain protein fold; KEGG: son:SO4629 hypothetical protein DNA sequence : ATGCAAAATATTGCAAAAATCATCGCTCAGGAACTTAATGTTCGTGAGCAGCAAGTGACGGCAACTATCACTCTATTGGA TGACGGCGCGACGGTTCCCTTCGTGGCGCGTTATCGTAAAGAGGTCACAGGTGGTTTAGACGATACCCAACTGCGCACTC TGTATAGCCGTCTGGGCTATCTGCGCGAACTCAACGATCGCCGTCAGGTGATCCTCTCCAGCATTCAGGCCCAGGGTAAG CTGACCGCCGAGCTGCAGGCCGCCATAGATCAGGCCGACAGCAAGACGCGCCTGGAAGATCTCTATCTGCCCTACAAGCC TAAGCGTCGTACCAAGGGACAGATCGCCATCGAGGCCGGTATCGAGCCCCTGGTGGATCGTTTGCTCAGTGATCGTCAGG CAGATATCGAGGCGCTGGCGAGCGAGTACCTCAATGCCGAGGCGGGTTTAGATGAGGTGAAGGCGGTGCTCGATGGCGCG CGCTTCATCCTGATGGAACGTTTCGCCGAAGACGCCGAGCTGCTGCAGAAGGTGCGCCAACACCTGACCCAGATCGCCGT GCTCGAGAGCCATGTGGTGAAGGGTAAGGAGAAAGAGGGTGCCAAGTTCAGAGACTATTTCGAGCACAGCGAGAAGCTGA TGAATGTGCCTTCGCACCGTGCCCTGGCCATGTTGCGTGGTCGCAACGAGGGCGTGTTGAGCCTGAGTATGAATGCGGAC CCGGATAGCGAGGCCAAGTCAGGCAGTTACTGCGAGGTGATTATTGCCGATCACTTTAACCTCAAGCTGAGTGATTCCGC CGTGGATCAGTGGCTTAAGCTGGTGGTCACCTCTACCTGGCGCATCAAGATCGCGCTGCAGATGGAGACTGAGTTTATCG CCAAGCTGCGCGAGCGTGCCGAGACAGAGGCGATCAATGTCTTCGCCCGCAACCTGGGCGATCTGCTGATGGCGGCGCCT GCCGGTGCCAAGGCGACGCTGGGCCTGGACCCAGGCCTGAGAACTGGCGTCAAGGTGGCCATAGTCAACAACACGGGCAA GTTGATGGCTCACACCACCATCTTCCCCCATGCACCGCAAAACCAGTGGGACAAGTCGATCCGTACCCTGGCGAATTTAG TGAAGATGCATAAGGTGGAGCTGATCGCCATTGGCAATGGCACCGCCTCACGTGAGACCGACAAGCTGGCGGGCGAGCTG ATTGCCGAGTTGAAGAGCGAGCTGCCGACACTCACCAAGATCATGGTGAGCGAGGCGGGCGCCTCCGTCTATTCCGCCTC TGAGCTGGCGGCGGAGGAGTTCCCCGAGCTGGACGTCTCGATTCGCGGCGCCGTCTCTATCGCCCGTCGCCTGCAGGATC CGCTGGCGGAGCTGGTGAAGATCGAACCTAAGTCTATCGGCGTGGGTCAGTATCAGCATGACGTGAGTCAGAGTCAGCTG TCACAATCCCTCGAGGCTGTGGTGGAAGACTGTGTAAACGGCGTGGGTGTGGATCTCAACATGGCCTCCATGCCGCTGCT GACTCAGGTGGCTGGCCTGAACAAGACGCTGGCACGCAATATCGTCGAATATCGCGACCAGAATGGTCAGTTTACCTCGC GTAAACAACTGCTTAAGGTGCCGCGTCTCGGCCCCAAGGCATTCGAGCAGGCGGCCGGTTTCCTGCGTATTCGTGAGGGT GACAACCCGCTGGATGCCAGCGCGGTACACCCAGAGACCTATGCCTTGGTTGAGTCTATCGCCAAGGCGCAGCAGCAGGC GGTGGATGCCCTGATAGGCAACACAGATCTGCTTAAGCAGATCGATGCCAAGGCGTTCGTGACCGAGGAGTTTGGTCTGC CGACCATAGAAGATATTCTCAGCGAGCTGGATAAGCCGGGTCGTGATCCCCGCGGCGAGTTTAAGACTGCCGTGTTTAAG GAAGGGGTTGAGGAGATCAAAGATCTTAAGGTGGAGATGATCTTAGAGGGCGTGGTGACCAATGTCACCAACTTCGGCGC CTTCGTCGATATCGGCGTGCATCAGGATGGCCTGGTGCATATCTCGTCGCTCACCGACAAGTTTGTCAGCGATCCCCACA CAGTGGTGAAGGCGGGCGACGTGGTTAAGGTCAAGGTGATGGAGGTCGACGCCGAGCGTAAGCGTATCAGCCTGACCATG CGTCTGGACGAGAAGCCGGGCGAGAAGCAAATGTCTCACCAAGGCGGCAAGGGCCAGGCGAAAGCGGGCCAAGGCAAGGG ACATCAAGGTAAAAGCCCACAGGGCAAGAGCCAGGCTAAGGGCCAGTATAAGCAGCCTAAGGCGCCGGCCAACGCGGCCA TGGGTAACGCCTTTGCCGATGCCTTCGCCAAACTGAAGAAGTAG Protein sequence : MQNIAKIIAQELNVREQQVTATITLLDDGATVPFVARYRKEVTGGLDDTQLRTLYSRLGYLRELNDRRQVILSSIQAQGK LTAELQAAIDQADSKTRLEDLYLPYKPKRRTKGQIAIEAGIEPLVDRLLSDRQADIEALASEYLNAEAGLDEVKAVLDGA RFILMERFAEDAELLQKVRQHLTQIAVLESHVVKGKEKEGAKFRDYFEHSEKLMNVPSHRALAMLRGRNEGVLSLSMNAD PDSEAKSGSYCEVIIADHFNLKLSDSAVDQWLKLVVTSTWRIKIALQMETEFIAKLRERAETEAINVFARNLGDLLMAAP AGAKATLGLDPGLRTGVKVAIVNNTGKLMAHTTIFPHAPQNQWDKSIRTLANLVKMHKVELIAIGNGTASRETDKLAGEL IAELKSELPTLTKIMVSEAGASVYSASELAAEEFPELDVSIRGAVSIARRLQDPLAELVKIEPKSIGVGQYQHDVSQSQL SQSLEAVVEDCVNGVGVDLNMASMPLLTQVAGLNKTLARNIVEYRDQNGQFTSRKQLLKVPRLGPKAFEQAAGFLRIREG DNPLDASAVHPETYALVESIAKAQQQAVDALIGNTDLLKQIDAKAFVTEEFGLPTIEDILSELDKPGRDPRGEFKTAVFK EGVEEIKDLKVEMILEGVVTNVTNFGAFVDIGVHQDGLVHISSLTDKFVSDPHTVVKAGDVVKVKVMEVDAERKRISLTM RLDEKPGEKQMSHQGGKGQAKAGQGKGHQGKSPQGKSQAKGQYKQPKAPANAAMGNAFADAFAKLKK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| NMB0075 | NP_273139.1 | transcriptional accessory protein Tex | Not tested | IHT-A | Protein | 0.0 | 64 |
