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Name : Shew_3507 (Shew_3507) Accession : YP_001095632.1 Strain : Shewanella loihica PV-4 Genome accession: NC_009092 Putative virulence/resistance : Resistance Product : ATP-dependent DNA helicase RecG Function : - COG functional category : L : Replication, recombination and repair COG ID : COG1200 EC number : - Position : 4193856 - 4195931 bp Length : 2076 bp Strand : + Note : catalyzes branch migration in Holliday junction intermediates DNA sequence : GTGGATAGACTCGATCTCATGGCTGTGACAGAGTTAAAGGGCGTTGCCGCCAAGATGGCGCAGCGGCTGGAGAAACTCGG CATCAATACAGTTCAGGATCTGCTGTTTCACCTGCCGCTACGCTACGAAGACCGCACCCAAATCTATCCCATCGCCGCCC TCTATCCCGGTAGCTACGGCACCATAGAGGGGATCATACAATCGACCCAGATCGTCCAGGGCCGCAAGCGTATGCTCACC TGCACGGTGCGTGACGACTCGGGCACCATAACCCTGCGCTTCTTCAACTTCTCCGCCGCCATGCGTAACGGCCTCGAAGA GGGCGAGCGCATTCGCGCCTATGGCGAGGTGCGTCGGGGCAAGCTTCACCGGGAGATCATCCACCCGGAATACAAGATGC TCAACGGCGAGAGCGACTTTAGCCTCAGCGATACCCTGACCCCCATCTACCCGACCACAGAGGGACTCAAGCAGGCCAGC TGGATCCGTTTGACGGATCAGGCCCTGGCGCTGCTGGCCCATGGCGCCCTGACCGAACTATTGCCGCCTCAGCTGAGGCC CAATCAACTCTCATTGGTCGACGCGTTGCAGTTGCTGCACAGACCCCCGAGCGAGGTCAGCCCCTTTGCCCTGGAGCAGG GCACGCATCCGGCGCAGCAAAGGCTGATCCAAGAGGAACTGCTGGCCCACAACCTGAGCATGTTACAGCTCAGGGCCCGC AGCAATCATGATAAGGCCATCGCGATGCAGCCCACCGGGCAGCTACTCAATCCCTTCCTGGCATCCTTACCCTTTAAGCC CACTGGCGCCCAGCAGAGAGTGGTAGCCGATATCACCCAAGATCTCGACAAGGCACACCCTATGATGCGCCTGGTGCAGG GCGATGTGGGCTCGGGCAAGACGCTAGTGGCGGCGCTGGCGGCGCTACAGGCCATAGAGAGCGGCTATCAGGTGGCCATG ATGGCGCCGACGGAACTGCTCGCCGAGCAGCACGCCAACAACTTCGCCGCCTGGTTTGAACACCTCGGCCTAACGGTCGG CTGGCTGGCGGGTAAGCTCAAGGGCAAGGCGCGGGCGCAGTCGCTGCAGCAGATTAAGAGCGGCGAGGCCCATATCGTCA TCGGCACCCACGCCATCTTTCAGGAGCAGGTGGAGTTCAATCGCCTGGCGCTGATCATCATCGATGAGCAGCACAGGTTC GGGGTGCATCAACGTCTGGGGCTGCGAGAGAAAGGGATCAGGCAGGGCTTCCACCCACATCAGCTGATCATGACGGCAAC CCCTATCCCCCGCACCTTGGCGATGACCGCCTATGCAGATCTCGATACCTCCATCATCGACGAGCTGCCGCCGGGGCGTA CGCCGGTGACCACGGTCGCCATCTCAGACAATCGCCGCGGTGAGGTGATCGATCGCGTGCGCCAGGCCGCGCTGCAAGAT GGGCGTCAAGCCTACTGGGTCTGCACCCTGATCGAAGAATCTGAGGTGCTGGAATGTCAGGCCGCAGAAGACACGGCCGA GGAGCTTAAGCAGCTGCTGCCCGAGCTCGCCATCGGCCTGGTGCATGGCCGCATGAAACCCGCCGAGAAACAAGCGATCA TGGACGCCTTCAAGGCCGGCAGCATACAGCTACTGGTGGCCACTACAGTGATCGAGGTGGGGGTCGATGTGCCCAATGCC AGCCTGATGATCATCGAAAACCCCGAGCGTCTGGGGCTCGCCCAGCTGCATCAGCTGCGGGGGCGTGTCGGCCGCGGCGC CGTGGCCAGCCACTGTGTGCTGCTCTACAAGGCGCCGCTTTCCCACACCGCCACCCAGCGCCTGGGAGTGCTTAGAGACA GTAACGACGGCTTCGTGATCGCCCAGAAAGATCTGGAGATCCGCGGGCCGGGTGAGGTCTTAGGCACCAAGCAGACAGGT ATCGCCGACATGAAGATAGCGGACTTGGTACGGGATCAGGCCCTCATCCCCCACATACAGAAACTGGCCCAACATGTGAT GCAAGAGGTGCCGGAAAATGTTGACGCCATAGTGCTGCGTTGGTTAGGGGAGCGCCAGCAATACGTGCAGGCCTAA Protein sequence : MDRLDLMAVTELKGVAAKMAQRLEKLGINTVQDLLFHLPLRYEDRTQIYPIAALYPGSYGTIEGIIQSTQIVQGRKRMLT CTVRDDSGTITLRFFNFSAAMRNGLEEGERIRAYGEVRRGKLHREIIHPEYKMLNGESDFSLSDTLTPIYPTTEGLKQAS WIRLTDQALALLAHGALTELLPPQLRPNQLSLVDALQLLHRPPSEVSPFALEQGTHPAQQRLIQEELLAHNLSMLQLRAR SNHDKAIAMQPTGQLLNPFLASLPFKPTGAQQRVVADITQDLDKAHPMMRLVQGDVGSGKTLVAALAALQAIESGYQVAM MAPTELLAEQHANNFAAWFEHLGLTVGWLAGKLKGKARAQSLQQIKSGEAHIVIGTHAIFQEQVEFNRLALIIIDEQHRF GVHQRLGLREKGIRQGFHPHQLIMTATPIPRTLAMTAYADLDTSIIDELPPGRTPVTTVAISDNRRGEVIDRVRQAALQD GRQAYWVCTLIEESEVLECQAAEDTAEELKQLLPELAIGLVHGRMKPAEKQAIMDAFKAGSIQLLVATTVIEVGVDVPNA SLMIIENPERLGLAQLHQLRGRVGRGAVASHCVLLYKAPLSHTATQRLGVLRDSNDGFVIAQKDLEIRGPGEVLGTKQTG IADMKIADLVRDQALIPHIQKLAQHVMQEVPENVDAIVLRWLGERQQYVQA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| recG | CAJ77039.1 | ATP-dependent DNA helicase | Not tested | AbaR1 | Protein | 1e-103 | 44 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Shew_3507 | YP_001095632.1 | ATP-dependent DNA helicase RecG | BAC0356 | Protein | 0.0 | 60 |
