Gene Information

Name : Shew_3466 (Shew_3466)
Accession : YP_001095591.1
Strain : Shewanella loihica PV-4
Genome accession: NC_009092
Putative virulence/resistance : Unknown
Product : glycerol kinase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG0554
EC number : -
Position : 4149031 - 4150527 bp
Length : 1497 bp
Strand : -
Note : TIGRFAM: glycerol kinase; PFAM: carbohydrate kinase, FGGY; KEGG: son:SO4230 glycerol kinase

DNA sequence :
GTGCAGCAGAAGTATGTCATCGCGCTCGATCAGGGCACGACCAGTTCGCGTACCATCATCTTCGATCACGACGCCAATGT
GGTCGCCATCTCCCAGCGAGAATTTTCCCAGATCTATCCTAAGGTGGGTTGGGTGGAACACGATCCCATGGAGATCTGGG
CCTCCCAGAGCTCGACCCTGATCGAGGCGCTCGCCAGAGCGGGGATCCACAGCGACGAAGTCGCTAGCATCGGCATCACC
AATCAGCGTGAAACCACTGTCCTGTGGGACAAGGCCACGGGTAAACCCATCTATAACGCCATCGTCTGGCAGTGTCGCCG
CAGCCAACCCCTGTGTGAATCCCTGAGGGCGGAGGGCTATGAGGATTACATCAGGCAGAATACAGGCTTGGTGTTAGACC
CCTATTTCTCGGCTACCAAGATCCGTTGGATCCTAGACAATGTCGAGGGCGCCAGAGAGAAGGCCGAGGCCGGTGAGCTG
CTGTTTGGCACCATAGATACCTGGCTGGTGTGGAAACTTACCGAGGGTAAGGTGCATGTGACAGATCCCACCAATGCTTC
ACGCACCATGCTGTACAACATACATCAGCAGGCCTGGGATCCTGTGTTGCTCGAGGCGCTGGAAATTCCCGCGAGTATCC
TGCCCGAGGTGAAGCCCTCCTGCGCCGTGTATGGCAAGACCCGAATTGCCGGGGAGGGTGGCGAGATCCCCGTGGCCGGT
ATGGCGGGGGATCAACAATCGGCCCTGTTCGGTCAGCTGTGTATCGACGAGGGGATGGCAAAGAATACCTATGGCACAGG
CTGTTTCCTGTTGATGAACACAGGTCTGCAGGCGGTGCAATCTAACCATGGCCTGCTGACCACCATAGCCGTGGGGCCAA
AGGGCGAGGTCAACTATGCCCTGGAGGGCTCGGTCTTCATGGGAGGCGCCACCATTCAGTGGCTGCGCGATGAGCTGGGG
CTGATCCGCGATGCCCAGGACACGGAATATTTTGCCCTTAAGGTCAGCGACAACAACGGTGTGTATCTGGTGCCGGCCTT
CGTGGGGCTCGGGGCGCCTTACTGGGATGCCAGCGCCCGCGGCGCCTTGGTCGGCCTCTCCAGGGGCGCGAATCGCAACC
ATATCATTCGTGCCGCCCTCGAGGCGATCGCCTATCAGAGCCGGGATCTGCTCGATGCCATGACCAAAGACAGTGGCGTG
CAGCTGAAACAGCTCAAGGTGGATGGTGGCGCGGTCGCCAACGATTTTCTGATGCAGTTTCAGGCGGATATTACCGATGT
CGAGGTGCAGCGACCTAAGGTGACGGAAACCACGGCCATGGGGGCGGCTTTCCTGGCGGGACTCGCGGTAGGCTTTTGGC
AATCGACAGCCGAATTGAAACACAAGGCGGGCGTGGAGCGCTGCTTTAAGCCAGCCATTGCCGACGATGAACGTGAAGCC
TTGTATCTTGGATGGAAACGCGCGGTTGCTCAGGTGACCAGCGAATCTGTGGCTTAA

Protein sequence :
MQQKYVIALDQGTTSSRTIIFDHDANVVAISQREFSQIYPKVGWVEHDPMEIWASQSSTLIEALARAGIHSDEVASIGIT
NQRETTVLWDKATGKPIYNAIVWQCRRSQPLCESLRAEGYEDYIRQNTGLVLDPYFSATKIRWILDNVEGAREKAEAGEL
LFGTIDTWLVWKLTEGKVHVTDPTNASRTMLYNIHQQAWDPVLLEALEIPASILPEVKPSCAVYGKTRIAGEGGEIPVAG
MAGDQQSALFGQLCIDEGMAKNTYGTGCFLLMNTGLQAVQSNHGLLTTIAVGPKGEVNYALEGSVFMGGATIQWLRDELG
LIRDAQDTEYFALKVSDNNGVYLVPAFVGLGAPYWDASARGALVGLSRGANRNHIIRAALEAIAYQSRDLLDAMTKDSGV
QLKQLKVDGGAVANDFLMQFQADITDVEVQRPKVTETTAMGAAFLAGLAVGFWQSTAELKHKAGVERCFKPAIADDEREA
LYLGWKRAVAQVTSESVA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glpK YP_005139160.1 glycerol kinase Not tested Not named Protein 4e-111 51