Gene Information

Name : Shew_3435 (Shew_3435)
Accession : YP_001095560.1
Strain : Shewanella loihica PV-4
Genome accession: NC_009092
Putative virulence/resistance : Unknown
Product : nicotinate-nucleotide pyrophosphorylase
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0157
EC number : 2.4.2.19
Position : 4101353 - 4102234 bp
Length : 882 bp
Strand : +
Note : KEGG: shm:Shewmr7_3603 nicotinate-nucleotide pyrophosphorylase; TIGRFAM: nicotinate-nucleotide pyrophosphorylase; PFAM: Quinolinate phosphoribosyl transferase

DNA sequence :
ATGCTGGAAAATGACATTAGATTAGCCGTCAAAGTCGCACTCGAAGAAGATTTAGGTTTTCAGGCCGATTCAAATCTTAC
TGCCGAAGAAAAGTTAAGTCTGGATATCACGGCTCAGCTTATTCCTAGTGATAAGTATGCGCAGGCTAGCTTGATCACCC
GCGAAGAAGGGGTCTTTTGTGGTAAGGCCTGGGCAGAACAAGTCTTTAACCAGCTAGGTGGTGAAGTTGCCTTACATTGG
CATGTGGACGATGGCGATCTCGTCTTACCGAACCAAGTGCTTTGTGAAATGTCAGGTTCGGCCCGTGCCATCCTGACCGG
TGAGCGCACCGCGATGAACTTCATCCAGACACTATCAGGCGTTGCCACCCTAACCAAACTCTATGTCGACAGACTGGCGG
GCACCCACTGCAAGCTATTAGATACCCGCAAGACGATTCCAGGTCTGCGCACGGCGCAAAAATATGCCGTCACCTGCGGT
GGTGGCAAGAACCATCGTATCGGCTTGTTCGATGCCTTCCTGATCAAGGAAAATCACATCATGGCCAGTGGCTCAATTGC
CTCTGCCATTAATGCCGCCCGCCAGCTTGCCAGCGATAAGCTAGTGGAGGTCGAAGTCGAAAGCATAGACGAACTCAAGC
AGGCACTCGATGCCGGCGCCGATATCGTCATGCTCGACAATTTTGACGTCACCATGATGATAGAGGCGGTAGAGCTAAAT
AATAGCTATAACGAAAACCAGCGTGTAAAACTCGAGGTATCGGGCAACGTGACGCTAGACACCATCTCAGATTATGCCAA
GACAGGCATAGACTACATTTCAGTCGGCGCCCTCACTAAGCACGTCAAGGCGCTGGATTTGTCGCTACGACTCAAAGACT
AG

Protein sequence :
MLENDIRLAVKVALEEDLGFQADSNLTAEEKLSLDITAQLIPSDKYAQASLITREEGVFCGKAWAEQVFNQLGGEVALHW
HVDDGDLVLPNQVLCEMSGSARAILTGERTAMNFIQTLSGVATLTKLYVDRLAGTHCKLLDTRKTIPGLRTAQKYAVTCG
GGKNHRIGLFDAFLIKENHIMASGSIASAINAARQLASDKLVEVEVESIDELKQALDAGADIVMLDNFDVTMMIEAVELN
NSYNENQRVKLEVSGNVTLDTISDYAKTGIDYISVGALTKHVKALDLSLRLKD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
nadC YP_281534.1 nicotinate-nucleotide pyrophosphorylase Not tested Not named Protein 7e-33 43