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Name : alr (Shew_3277) Accession : YP_001095402.1 Strain : Shewanella loihica PV-4 Genome accession: NC_009092 Putative virulence/resistance : Unknown Product : alanine racemase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0787 EC number : 5.1.1.1 Position : 3920029 - 3921105 bp Length : 1077 bp Strand : - Note : converts L-alanine to D-alanine which is used in cell wall biosynthesis; binds one pyridoxal phosphate per monomer; forms a homodimer DNA sequence : TTGAAACCCTTTCCCCGAGCAGAGATCAGCGGCGATGCGCTGAAAGCTAACCTAAAGCGATTACGCCAGCTGGCACCCCA GAGTAAGGTGATGGCCGTGGTGAAGGCCAACGGCTATGGTCACGGCCTGTTGAATGTGGCCCATTGTCTGGCCAGCGCCG ACGGTTTCGGCCTGGCGCGCCTCGAAGAGGCACTGGAGCTCAGGGCCGGTGGTGTGAGCGCCAAGCTGCTTCTGCTGGAA GGCTTCTTTCGCCCAAGCGACGTGGCGACCCTAGTCGAGCATGATATCGATACCGTGGTGCACCACGAATCCCAGCTCGA GATGCTGGAGGCCGCCAGCCTAGCCAAGCCGGTGACAGTGTGGATGAAGATAGATACCGGCATGCATCGTCTGGGCTTTA ACCTGGATCAGTTTGAGGCTATCTATCAGCGTCTGCAGGCCTGTGCCAACGTGGCCAAGCCCATTAATCTGATGACACAT TTTGCCTGCGCCGACGAGCCGGATAATCCGGCGACCGCCGAGCAGGCGCGCCGCTTCGAGCAGATGACGGCGAACTTGCC GGGTGATCGCACCCTGGCCAACTCGGCCGCGACCCTCTACTGGCAGGCGACTCAGGCCGACTGGATCCGTCCGGGGATCG CGCTTTATGGCGTTTCGCCTGTGGTTGGCGATCTCGGTCGCAATCATGGCCTGGAGCCCGCCATGGAGCTGGTGTCTCAG CTGATTGCGGTACGGGATCATAAGGCCGGCGATCCCGTCGGCTATGGCAGCTACTGGCGCGCCAAGCAAGATACCAAGCT AGGTGTGGTGGCCATAGGTTATGGCGACGGTTATCCCCGCAACGCCCCAGAAGGCACCCCTGTCTGGGTCAATGGCCGCC TGGTACCCGTGGTGGGACGTGTCTCCATGGATATGCTGACGGTGGATCTCGGCCTGGATGCCACAGACAAGGTGGGCGAT ACCGCCGTGCTCTGGGGCAAGGCGCTGCCGGTCGAAGAGGTGGCCGAGCATATCGGCACTATCGCCTATGAGCTGGTGAC TAAGCTGACTCCCCGCGTCGCCGTCTGCCTCGAATGA Protein sequence : MKPFPRAEISGDALKANLKRLRQLAPQSKVMAVVKANGYGHGLLNVAHCLASADGFGLARLEEALELRAGGVSAKLLLLE GFFRPSDVATLVEHDIDTVVHHESQLEMLEAASLAKPVTVWMKIDTGMHRLGFNLDQFEAIYQRLQACANVAKPINLMTH FACADEPDNPATAEQARRFEQMTANLPGDRTLANSAATLYWQATQADWIRPGIALYGVSPVVGDLGRNHGLEPAMELVSQ LIAVRDHKAGDPVGYGSYWRAKQDTKLGVVAIGYGDGYPRNAPEGTPVWVNGRLVPVVGRVSMDMLTVDLGLDATDKVGD TAVLWGKALPVEEVAEHIGTIAYELVTKLTPRVAVCLE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| dadX | AAC61705.1 | alanine racemase | Not tested | PAI I CFT073 | Protein | 4e-56 | 45 |
