Gene Information

Name : Shew_3244 (Shew_3244)
Accession : YP_001095369.1
Strain : Shewanella loihica PV-4
Genome accession: NC_009092
Putative virulence/resistance : Virulence
Product : 4Fe-4S ferredoxin
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG0437
EC number : -
Position : 3881176 - 3881892 bp
Length : 717 bp
Strand : -
Note : PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: vpa:VP2011 tetrathionate reductase, subunit B

DNA sequence : 
ATGTTAGATAGAAGAAGAACACTCAAACTCCTGGCTGGCGGCGCCATCGCAACCACAGGCATGATGTTTATCCCCGCCGA
TCCTGTGATCGCCGATATTCGTCGTCAGGGTAAGAAGCGTCTGGCCATGGTGATCGATCTCGGTCGCTGCAACGGTTGCA
AGGCCTGTGTGGTCTCCTGTGGTATAGAGAACGGCAACCTGCCTGACGAGCATAGAACCCAGGTGCCGCAACACAGCGTG
GATCTGAATGGCAAGCAGTATGTGTTTAACATGCCGATCCTCTGCAACAACTGCGACAGGCCCTCCTGCGTGTCTGTCTG
CCCGACGGGCGCCACCTTCAAGCGCGAGCAGGACGGCATAGTGGTGGTGGACTCAGAGCTGTGTATCGGTTGTAACTACT
GCATCCAGGCTTGCCCCTACGATGGGGTGCGTTTCACCCATTCAGCCACGGGCACCGTGGATAAATGTAACTTCTGTATT
CAGCGAACCAGCCGCGGCTTGCTGCCTGCCTGTGTCGAGACCTGTACCGGTGGTGCCCGTGTCTTTGGTGACATTAACGA
CCCCGAGAGCGAGGTCTCCAGGCTGATACGTCAGCACAGGCCGCTGGTGTTGCAGGCCGGTAAGCAAACCTCCCCCAATG
TGTTCTATATCGGCTTGACCCAAGACGAGAGCGACAGGGCATACAGTATCAATTCTCCCCAAACCTGGCAGAGGTAG

Protein sequence : 
MLDRRRTLKLLAGGAIATTGMMFIPADPVIADIRRQGKKRLAMVIDLGRCNGCKACVVSCGIENGNLPDEHRTQVPQHSV
DLNGKQYVFNMPILCNNCDRPSCVSVCPTGATFKREQDGIVVVDSELCIGCNYCIQACPYDGVRFTHSATGTVDKCNFCI
QRTSRGLLPACVETCTGGARVFGDINDPESEVSRLIRQHRPLVLQAGKQTSPNVFYIGLTQDESDRAYSINSPQTWQR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ttrB YP_216393.1 tetrathionate reductase complex subunit B Virulence SPI-2 Protein 1e-47 47
ttrB NP_805056.2 tetrathionate reductase subunit B Virulence SPI-2 Protein 1e-47 47
ttrB NP_456142.1 tetrathionate reductase subunit B Virulence SPI-2 Protein 1e-47 47
ttrB NP_460350.1 tetrathionate reductase complex subunit B Virulence SPI-2 Protein 1e-47 47
ttrB CAB37414.1 tetrathionate reductase subunit B (TtrB) Virulence SPI-2 Protein 8e-48 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Shew_3244 YP_001095369.1 4Fe-4S ferredoxin VFG0486 Protein 4e-48 47