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Name : Shew_3220 (Shew_3220) Accession : YP_001095345.1 Strain : Shewanella loihica PV-4 Genome accession: NC_009092 Putative virulence/resistance : Resistance Product : beta-lactamase Function : - COG functional category : V : Defense mechanisms COG ID : COG2602 EC number : 3.5.2.6 Position : 3843326 - 3844132 bp Length : 807 bp Strand : - Note : PFAM: penicillin-binding protein, transpeptidase; KEGG: shm:Shewmr7_3328 beta-lactamase DNA sequence : TTGTTAAGTTGGGCTGGCGGCGCGGCGGCAGTACCTCAAACTGGGCCTGATAAACCGGCGGCAGAGCAAGAGTCGGCCGG GGCGCTCAGGCTGGATGGTGAGATACAGGCGGTATTCGATGCCGTGGGTGCGAAAGGCGTCATGGTGTTGCTGGATGATA AAGGGGGGAAGCTGCTGACTAACGACGCCGCCCGCAGCCAGCATCCTTATATTCCTGCCTCCACCTTTAAGATCCCCCAC AGCCTATTGCTGCTAGAGGCGGGGATAGTAGAAGATGAGCATAGCCGGTTTGCCTGGGACGGGGTGAAACGCACATATAG CCCCTGGAATCGCGACCATAACTTTATTGGTGCGATGAAGTATTCCGTGGTACCCATCTATCAAAAATTGGCGTTGCAGC TGGGGGCCGAGCGTATGGCCAGTGGGCTGGAAAATCTCGATTATGGTAACGCAAATATCGGCGGCGGGCTGGACAGCTTC TGGCTCGACGGTGACTTGGCGATATCGGCTCTCGAGCAGGTGCACTTCCTTAGGCGTCTGTATCACAATCGACTTCCCCT GTCAGAGCGCAGTCAGCGCATCGTTAAGACCATGATGCTTAACGAGGCCAACGGCGATTGGGTACTAAGGGCCAAGACGG GTTATGGTGTGCGCAAGGGGCAGAAACTGGGATGGTGGGTCGGCTGGCTCGAGCGCGAAGAGAACACTTACTTCTTCGCC ATGAATATGGATATCACCTCAGATAAAGACTTAGCGCTGCGTAAGCGGGTGGTGAAGCATCTCTTAAAAGCCAAGGGCTG GATGTGA Protein sequence : MLSWAGGAAAVPQTGPDKPAAEQESAGALRLDGEIQAVFDAVGAKGVMVLLDDKGGKLLTNDAARSQHPYIPASTFKIPH SLLLLEAGIVEDEHSRFAWDGVKRTYSPWNRDHNFIGAMKYSVVPIYQKLALQLGAERMASGLENLDYGNANIGGGLDSF WLDGDLAISALEQVHFLRRLYHNRLPLSERSQRIVKTMMLNEANGDWVLRAKTGYGVRKGQKLGWWVGWLEREENTYFFA MNMDITSDKDLALRKRVVKHLLKAKGWM |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ACICU_00226 | YP_001844885.1 | Beta-lactamase class D | Not tested | AbaR20 | Protein | 3e-41 | 44 |
| bla OXA-10 | CAJ77047.1 | Oxacillinase | Not tested | AbaR1 | Protein | 7e-48 | 43 |
| blaOXA-129 | AET25386.1 | OXA-129 beta-lactamase | Not tested | PAGI-2(C) | Protein | 4e-47 | 43 |
| bla OXA-129 | AFG30109.1 | OXA-129 beta-lactamase | Not tested | PAGI-2 | Protein | 4e-47 | 43 |
| blaOXA-2 | YP_005176242.1 | beta-lactamase OXA-2 protein | Not tested | ICEPmu1 | Protein | 1e-41 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Shew_3220 | YP_001095345.1 | beta-lactamase | HM015773.1.gene6.p01 | Protein | 1e-61 | 55 |
| Shew_3220 | YP_001095345.1 | beta-lactamase | AY500137.1.gene1.p01 | Protein | 2e-61 | 55 |
| Shew_3220 | YP_001095345.1 | beta-lactamase | AY343493.1.gene1.p01 | Protein | 2e-62 | 55 |
| Shew_3220 | YP_001095345.1 | beta-lactamase | HQ700343.1.gene1.p01 | Protein | 2e-59 | 54 |
| Shew_3220 | YP_001095345.1 | beta-lactamase | JN205800.1.gene6.p01 | Protein | 2e-61 | 54 |
| Shew_3220 | YP_001095345.1 | beta-lactamase | X58272.1.gene1.p01 | Protein | 9e-48 | 44 |
| Shew_3220 | YP_001095345.1 | beta-lactamase | AF024602.1.gene3.p01 | Protein | 2e-41 | 44 |
| Shew_3220 | YP_001095345.1 | beta-lactamase | AF300985.1.gene1.p01 | Protein | 5e-41 | 43 |
| Shew_3220 | YP_001095345.1 | beta-lactamase | AF350424.1.gene1.p01 | Protein | 4e-39 | 43 |
| Shew_3220 | YP_001095345.1 | beta-lactamase | X75562.1.gene1.p01 | Protein | 4e-45 | 43 |
| Shew_3220 | YP_001095345.1 | beta-lactamase | NC_010410.6002874.p0 | Protein | 4e-48 | 43 |
| Shew_3220 | YP_001095345.1 | beta-lactamase | AJ854182.1.gene1.p01 | Protein | 1e-47 | 43 |
| Shew_3220 | YP_001095345.1 | beta-lactamase | U37105.2.gene2.p01 | Protein | 4e-48 | 43 |
| Shew_3220 | YP_001095345.1 | beta-lactamase | AM932669.1.gene2.p01 | Protein | 3e-47 | 43 |
| Shew_3220 | YP_001095345.1 | beta-lactamase | U63835.1.gene1.p01 | Protein | 8e-42 | 43 |
| Shew_3220 | YP_001095345.1 | beta-lactamase | M95287.gene.p01 | Protein | 5e-42 | 43 |
| Shew_3220 | YP_001095345.1 | beta-lactamase | JF795487.1.gene1.p01 | Protein | 4e-41 | 43 |
| Shew_3220 | YP_001095345.1 | beta-lactamase | AM412777.1.gene1.p01 | Protein | 3e-47 | 42 |
| Shew_3220 | YP_001095345.1 | beta-lactamase | AY445080.1.gene1.p01 | Protein | 2e-47 | 42 |
| Shew_3220 | YP_001095345.1 | beta-lactamase | U59183.1.gene3.p01 | Protein | 5e-47 | 42 |
| Shew_3220 | YP_001095345.1 | beta-lactamase | Z22590.1.gene1.p01 | Protein | 2e-47 | 42 |
| Shew_3220 | YP_001095345.1 | beta-lactamase | AF231133.1.gene3.p01 | Protein | 2e-45 | 42 |
| Shew_3220 | YP_001095345.1 | beta-lactamase | AF315351.1.gene2.p01 | Protein | 1e-41 | 42 |
| Shew_3220 | YP_001095345.1 | beta-lactamase | GQ202693.1.gene2.p01 | Protein | 5e-42 | 42 |
| Shew_3220 | YP_001095345.1 | beta-lactamase | EF552405.1.gene1.p01 | Protein | 1e-41 | 42 |
| Shew_3220 | YP_001095345.1 | beta-lactamase | AY289608.1.gene2.p01 | Protein | 2e-40 | 42 |
| Shew_3220 | YP_001095345.1 | beta-lactamase | AY423074.1.gene1.p01 | Protein | 8e-39 | 42 |
| Shew_3220 | YP_001095345.1 | beta-lactamase | DQ522237.1.gene5.p01 | Protein | 8e-43 | 41 |
| Shew_3220 | YP_001095345.1 | beta-lactamase | L07945.1.gene1.p01 | Protein | 9e-43 | 41 |
| Shew_3220 | YP_001095345.1 | beta-lactamase | Y10693.2.gene1.p2 | Protein | 8e-43 | 41 |
| Shew_3220 | YP_001095345.1 | beta-lactamase | JF800667.1.gene2.p01 | Protein | 3e-40 | 41 |
| Shew_3220 | YP_001095345.1 | beta-lactamase | AF317511.1.gene5.p01 | Protein | 2e-39 | 41 |
| Shew_3220 | YP_001095345.1 | beta-lactamase | AY139598.1.gene3.p01 | Protein | 4e-40 | 41 |
| Shew_3220 | YP_001095345.1 | beta-lactamase | AF371964.1.gene1.p1 | Protein | 6e-40 | 41 |
