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Name : Shew_3173 (Shew_3173) Accession : YP_001095298.1 Strain : Shewanella loihica PV-4 Genome accession: NC_009092 Putative virulence/resistance : Unknown Product : succinate-semialdehyde dehydrogenase Function : - COG functional category : C : Energy production and conversion COG ID : COG1012 EC number : 1.2.1.16 Position : 3776933 - 3778390 bp Length : 1458 bp Strand : - Note : KEGG: cps:CPS_2023 succinate-semialdehyde dehydrogenase; TIGRFAM: succinic semialdehyde dehydrogenase; PFAM: aldehyde dehydrogenase DNA sequence : ATGCAGGGAATTAAAGACACTCAGTTAATCAAACTTTCCTCCTATATCGACGGCAGATGGACGGTGGGCGAGCAGCGCTT CGACGTGGTGAATCCGGCCAGCCAGGAGGTGATCGCCCAGGTGGTTGACGCCAGTCTCGACGATACCCAGGAGGCCATAT TGGCCGCCAAGCGGGCACTGCCTGAGTGGTCTAAGCGTTCAGCTAACGAGCGCGCCGCCCTGATGCGTAAATGGTTCAAC CTGATGATGGAGCACCAGGAAGATCTGGGCCGCTTGCTGACCCTGGAGCAGGGTAAGCCCCTGGCCGAGGCCAAGGGGGA GATCGCCTATGGCGCCGCCTTTATCGACTGGTTCGCCGAGGAGGGCAAGCGTGTCTATGGTGACACTATTCCGGCGCCTG CTAACGACAAGCGTATTTTGGTGATCAAGCAGCCTGTGGGCGTGGTGGCCTCTATTACTCCGTGGAACTTCCCCAACGCC ATGATCGCCCGTAAGGCGGCGGCTGCGCTGGCGGCCGGTTGTACCTTCGTGGCACGTCCCTCTCCGCTGACACCGCTGTC GGCCCTGGCGATGGCCGAGCTGGCAGAGCGCGCAGGTATTCCTGCCGGGGTGTTCAACATAGTGGTGGGCGAAGATGCCG TGGGCATGGGCAAGGTGCTGACCCAGCATCCGGACGTGGCTAAGTTCACCTTCACCGGCTCTACCGCCGTGGGCAAGATT TTGCTGGCTCAGTGCGCGACCAGCGTGAAGAAGGTCTCCATGGAGCTGGGGGGCAATGCGCCCTTTATCGTGTTCGACGA TGCCGATATCGACGCCGCGGTGCAGGGCGCCCTGATCTCCAAGTATCGCAACGCCGGGCAAACCTGTGTCTGCACCAACC GTATCTTTGTGCAGAAGGGAGTTGCCGCGGCCTTTACCGAAAAATTTACCGCCGCCGTGGCCAATCTCAAGTTGGGCGAT GGCCTGGGCGATGGCGTGACCGTCGGCCCCATGATCTCCAAGGATGCAGTGCAGAATGTGCTTAAGCTGGTGGATGACAC AGTGGCAAGCGGTGCCAAGCTGGTAACCGGCGGCCAGCCGAGTGAGCTGGGCGAGAGTTTCCTGGCACCTGTGATCGTCA CAGATGTGACCAACGAGATGCCGCTGGCACGCAACGAGATCTTCGGCCCCGTGACCCCTATCATCAGCTTCGATAGCGAG GCTGAGGCGCTGGCCATGGCCAACGATACCGAATATGGCCTGGCCGCCTATTTCTACGCCCGGGATATCGGCCGCATCTT CCGCGTCGCCGAGGGGCTGGAGTATGGCATGGTGGGCGTCAACGAGGGGATCATCTCCAACGCCGCCGCACCTTTTGGCG GGGTGAAGCAGTCGGGCAACGGCCGTGAAGGCTCCAAGTATGGCCTGGACGATTATCTGGAAATTAAATACCTGTGCCTC GGTGGCCTGGATAAGTAG Protein sequence : MQGIKDTQLIKLSSYIDGRWTVGEQRFDVVNPASQEVIAQVVDASLDDTQEAILAAKRALPEWSKRSANERAALMRKWFN LMMEHQEDLGRLLTLEQGKPLAEAKGEIAYGAAFIDWFAEEGKRVYGDTIPAPANDKRILVIKQPVGVVASITPWNFPNA MIARKAAAALAAGCTFVARPSPLTPLSALAMAELAERAGIPAGVFNIVVGEDAVGMGKVLTQHPDVAKFTFTGSTAVGKI LLAQCATSVKKVSMELGGNAPFIVFDDADIDAAVQGALISKYRNAGQTCVCTNRIFVQKGVAAAFTEKFTAAVANLKLGD GLGDGVTVGPMISKDAVQNVLKLVDDTVASGAKLVTGGQPSELGESFLAPVIVTDVTNEMPLARNEIFGPVTPIISFDSE AEALAMANDTEYGLAAYFYARDIGRIFRVAEGLEYGMVGVNEGIISNAAAPFGGVKQSGNGREGSKYGLDDYLEIKYLCL GGLDK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| orf17 | AAO17183.1 | Orf17 | Not tested | tcd island | Protein | 1e-125 | 59 |
| cur_1509 | YP_001800903.1 | NAD-dependent aldehyde dehydrogenase | Not tested | Not named | Protein | 1e-69 | 41 |
