Gene Information

Name : Shew_3130 (Shew_3130)
Accession : YP_001095255.1
Strain : Shewanella loihica PV-4
Genome accession: NC_009092
Putative virulence/resistance : Unknown
Product : glutamate--tRNA ligase
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG0008
EC number : 6.1.1.17
Position : 3721930 - 3722889 bp
Length : 960 bp
Strand : +
Note : PFAM: glutamyl-tRNA synthetase, class Ic; KEGG: shm:Shewmr7_3293 glutamyl-tRNA synthetase, class Ic

DNA sequence : 
ATGAGCGACATAGAAAGTGTGAACAAAGGTTTTGCCGTGATCCCCCAAGCAGACCCCTCCCTCTCCCCCGATAACCCAAT
GCAAATCGACAAGCCCTATGTCGGCCGTTTCGCGCCCTCGCCCTCCGGTCCACTGCACTTTGGCTCGCTCATCGCCGCGC
TGGGCAGCTATCTGCGTGCCCGCGCCGAGCAGGGACAATGGCTGGTGCGCATCGAAGATATCGATCCCCCCAGAGAGGTA
AAAGGTGCCAGCGACCTCATCCTCAAGACCCTGGAGGCCTACGGCCTGCATTGGGATGGCGCCGTGCTCTACCAAAGCAG
CCGCCTGGATGACTATCAGGCTAGGCTTAACAGCCTGCTGGCAGAGGACAAGGCTTACTACTGCCAATGTACCCGCAAGC
AGATCCAGGCGATGGGCGGCACCTACGATGGCCGCTGCGCGATCCGCACAGCTAAACATACAGCAGGCGCTATCCGCATC
CGTAACACGCTTGCGATAGATCATTTCGATGATGAGCTGCTGGGCCCTATCCGGGTCGAGCCAGAGTTTGCCGCCGAGGA
CTTTATTATCAAGCGCCGCGACGGCCTCTACGCTTATCAACTGGCCGTGGTGATGGACGATGCCTTTCAGGGGATAACTG
AGGTAGTGCGCGGCGCCGACCTGCTCACCTCCAGCGCCCGCCAGGCGACCCTGTTTAATTTATTCGATGACAACGCGCCT
AAGTGGCTTCATCTGCCGCTGGCCTGCGCCGAGCCTGGGATGAAACTCTCGAAGCAGAATCACGCCCCGGCCATAGATCT
TAAGGCGCCCCAGGCCAGCATCAACGCCGCGCTCGCCTTCCTGGGCCAGGCCCCCTGCGATATCGATAGTGTCAAGACCA
TGCTGGCCCAGGCCGTGAGCCAGTTCGAATTGAGCCGTATCCCGCGCCAGCAGGAGATCATACTTGCGCCGGGCGCTTAA

Protein sequence : 
MSDIESVNKGFAVIPQADPSLSPDNPMQIDKPYVGRFAPSPSGPLHFGSLIAALGSYLRARAEQGQWLVRIEDIDPPREV
KGASDLILKTLEAYGLHWDGAVLYQSSRLDDYQARLNSLLAEDKAYYCQCTRKQIQAMGGTYDGRCAIRTAKHTAGAIRI
RNTLAIDHFDDELLGPIRVEPEFAAEDFIIKRRDGLYAYQLAVVMDDAFQGITEVVRGADLLTSSARQATLFNLFDDNAP
KWLHLPLACAEPGMKLSKQNHAPAIDLKAPQASINAALAFLGQAPCDIDSVKTMLAQAVSQFELSRIPRQQEIILAPGA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00313 YP_008207778.1 Glutamyl- and glutaminyl-tRNA synthetase Not tested AbaR25 Protein 1e-49 47
BJAB0868_00317 YP_008211643.1 Glutamyl- and glutaminyl-tRNA synthetase Not tested AbaR26 Protein 1e-49 47