Gene Information

Name : Shew_2817 (Shew_2817)
Accession : YP_001094942.1
Strain : Shewanella loihica PV-4
Genome accession: NC_009092
Putative virulence/resistance : Unknown
Product : nucleoside transporter
Function : -
COG functional category : F : Nucleotide transport and metabolism
COG ID : COG1972
EC number : -
Position : 3338227 - 3339486 bp
Length : 1260 bp
Strand : -
Note : TIGRFAM: nucleoside transporter; PFAM: Na+ dependent nucleoside transporter; nucleoside recognition domain protein; Na+ dependent nucleoside transporter domain protein; KEGG: shm:Shewmr7_1100 nucleoside transporter

DNA sequence :
ATGGATATTTTAATGAGTTTAGTAGGGGTGGTCGTCCTACTCGCGATAGGTTTTTTGCTTTCTAACAACAAAAAAGCTAT
CAACATGCGTACCGTATTTGGTGCACTTGCGATTCAGGCATTCTTTGCAGGTTTCGTACTGTACGTACCTATCGGTAAAG
ACATTCTAAAAAGTGTTTCAGATGGCGTATCTAGCGTTATCGGTTACGCACAAAACGGTATCGGCTTCCTGTTCGGCGAT
CTGGCTAACTTCAAAGTGGGCTTCATCTTCGCTATCAACGTACTGCCTGTTATCGTCTTCTTCTCATCGCTGATCGCGGT
ACTTTACTACCTGGGCATCATGCAGTGGATCATCCGTATCATCGGTGGTGGTCTGCAGAAAGCTCTGGGTACTAGCCGTA
CTGAGTCTATGTCAGCGACTGCTAACATCTTCGTTGGTCAAACTGAAGCGCCACTGGTTGTTCGTCCATTCATCGCGACT
ATGACTCAATCTGAGCTGTTCGCTATCATGGTGGGTGGTCTAGCCTCTATCGCTGGTTCAGTATTGGCTGGTTACGCGCA
GATGGGTGTGCCTATCGAGTACCTAGTTGCTGCATCATTCATGGCTGCACCTGGTGGTCTATTGATGGCTAAGCTAATGC
ATCCTGAAACAGAGAAAACTGTTAACGAAATGGATGAGCTGCCAGAAGATCCAGACAAGCCAGCTAACGTACTTGACGCT
GCTGCTGCCGGTGCTTCATCTGGTATGCACCTAGCTCTGAACGTTGGTGCTATGCTGCTAGCCTTCGTTGGTCTGATTGC
GATGATCAACGGTATTATCGGTGGCGTAACTGGTCTGTTCGGTGCGGAAGGTATCACCCTAGAGCTGATCCTTGGTTACA
TCTTCATGCCACTTGCATTCCTAATCGGTGTGCCTTGGAACGAAGCGCTTATCGCAGGTTCTTTCATCGGTCAGAAGATC
GTTGTTAACGAATTCGTTGCTTACCTGAACTTTGCTCCATACCTGAAAGACGTTGCTGACGGTGGTCTGCTAGTTGAAGC
GACTAACGCTGTAATGACTGACAGAACTAAGGCAATCATTTCATTCGCTCTGTGTGGTTTCGCGAACCTGTCTTCTATCG
CGATTCTACTGGGTGGTCTAGGTGCAATGGCTCCTACCCGTCGTCACGACCTAGCTAAGCTTGGTATCCGTGCGGTGATA
GCTGGCTCTCTGGCTAACCTAATGAGTGCAACGCTAGCGGGTCTGTTCCTAGCGTTATAA

Protein sequence :
MDILMSLVGVVVLLAIGFLLSNNKKAINMRTVFGALAIQAFFAGFVLYVPIGKDILKSVSDGVSSVIGYAQNGIGFLFGD
LANFKVGFIFAINVLPVIVFFSSLIAVLYYLGIMQWIIRIIGGGLQKALGTSRTESMSATANIFVGQTEAPLVVRPFIAT
MTQSELFAIMVGGLASIAGSVLAGYAQMGVPIEYLVAASFMAAPGGLLMAKLMHPETEKTVNEMDELPEDPDKPANVLDA
AAAGASSGMHLALNVGAMLLAFVGLIAMINGIIGGVTGLFGAEGITLELILGYIFMPLAFLIGVPWNEALIAGSFIGQKI
VVNEFVAYLNFAPYLKDVADGGLLVEATNAVMTDRTKAIISFALCGFANLSSIAILLGGLGAMAPTRRHDLAKLGIRAVI
AGSLANLMSATLAGLFLAL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
yutK YP_005163383.1 putative sodium/nucleoside cotransporter Not tested Not named Protein 2e-71 47