Gene Information

Name : Shew_2575 (Shew_2575)
Accession : YP_001094700.1
Strain : Shewanella loihica PV-4
Genome accession: NC_009092
Putative virulence/resistance : Unknown
Product : 3-oxoacid CoA-transferase subunit A
Function : -
COG functional category : I : Lipid transport and metabolism
COG ID : COG1788
EC number : 2.8.3.5
Position : 3035225 - 3035926 bp
Length : 702 bp
Strand : +
Note : KEGG: shm:Shewmr7_2399 3-oxoacid CoA-transferase, A subunit; TIGRFAM: 3-oxoacid CoA-transferase, A subunit; PFAM: coenzyme A transferase

DNA sequence :
ATGGCAGGACTCAATAAGCTGGTCACCAGCTATGAAGAAGCATTGGAAGGTCTGACAGACAACATGACCGTCATGGTCGG
TGGCTTCGGCCTCTGCGGTATTCCCGAAGGCTTGATCGCCCAGATGGTTAAGAGTGGTGCCAAGGGGCTCACCGCCATCT
CGAACAACGCCGGGGTAGACGATTTCGGCCTGGGGCTGCTGCTCAAGAGCCGCCAGATCAGCACCATGATCGCCTCCTAT
GTGGGTGAGAACGCCACCTTCGAGCAGCAGATGCTCTCGGGTGAACTCAACGTTATCCTCACCCCGCAAGGCACGCTAGC
CGAGAAGATCCGCGCCGGCGGCGCCGGTATCCCCGCCTTCTTCACCGCGACCGGTTACGGCACCCCTGTGGCCGAAGGCA
AGGAGACCCGTGAGATCGATGGTCGTCACTATGTGCTGGAGCCCGCACTGACCGCAGACTTCGCCCTGGTGCGCGCCTGG
AAGGCCGATACCATGGGTAACCTGGTGTTTCGCAAGACGGCGGCTAACTTCAACCCTATGATGGCCACGGCCGGTAAGAT
CACTGTGGTCGAAGCCGAGCATATCGTCGAGCCGGGCGAGCTGGATCCAGACCATATCCATACACCAGGCATCTATGTGG
ATCGCCTGATCCAAGGTACGTTCGAGAAGCGTATCGAGCAGCGCACAGTGAAGAGCAAATAG

Protein sequence :
MAGLNKLVTSYEEALEGLTDNMTVMVGGFGLCGIPEGLIAQMVKSGAKGLTAISNNAGVDDFGLGLLLKSRQISTMIASY
VGENATFEQQMLSGELNVILTPQGTLAEKIRAGGAGIPAFFTATGYGTPVAEGKETREIDGRHYVLEPALTADFALVRAW
KADTMGNLVFRKTAANFNPMMATAGKITVVEAEHIVEPGELDPDHIHTPGIYVDRLIQGTFEKRIEQRTVKSK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAO18070.1 unknown Not tested TTSS locus Protein 9e-36 45