Gene Information

Name : Shew_2563 (Shew_2563)
Accession : YP_001094688.1
Strain : Shewanella loihica PV-4
Genome accession: NC_009092
Putative virulence/resistance : Unknown
Product : alcohol dehydrogenase
Function : -
COG functional category : R : General function prediction only
COG ID : COG2130
EC number : -
Position : 3021146 - 3022141 bp
Length : 996 bp
Strand : +
Note : PFAM: Alcohol dehydrogenase, zinc-binding domain protein; KEGG: ppr:PBPRB1158 hypothetical alcohol dehydrogenase, zinc-containing

DNA sequence : 
ATGCAAGCACAAGAGATAACACTGGCCAGCCGCCCTGAAGGCATGCCAACCCAAGCCAACTTTGGCCTTAAGCAGGTGGA
ACTTCCGGCGCTCAAGCCGGGCGAATTCCTGGTCAAGAACCTCTGGATGTCGGTCGACCCCTACATGCGCGGCCGCATGA
TAGACAGAGAGAGCTATATCGCCCCCTTCGCCCTGGGCGAAGTGCTGGAAGGCGGCGCCATTGGTGAGGTAATCGAGTCG
AACCATGATGGCTTCCCCGTGGGCAGCAAGGTCAGCAGCATGAAGGGCTGGCGCAGCCACTATGTCACCGACGGTACAGA
TCATACCCTGCTACCGGACACCCCTTTGTCAGAATCTCATTTCCTCGGCGTCATGGGCATGCCTGGCATGACCGCCTGGA
CCGGCCTTAACCGTATCGCCCAACTGAAGGAAGGCGAGACCCTGTTTGTCTCGGCCGCCTCGGGCGCGGTCGGCAGCGTC
GCCTGTCAGCTAGGTCTCTTGATGGGCGCCAAGGTGGTTGCCTCGGTCGGCTCGGATGAAAAAGCCGAGGCCCTCAAGGC
GATGGGAATCGAGCAGGTGATCAACTACAAGACCACACCCAACCTGAGTCAGGCGTTGAAGGACACCGCGCCACAAGGCG
TTGATGTCTATTTTGAAAACGTCGGTGGCGAGCATCTGGCCGCGGCACTGGACAACATGAACGACCATGGCCGTATCGCC
GTATGTGGCATGATCGCCCAGTACAACGACACTAAGCCGACCCCGGGCCCAAGCAACCTGGCCTATATCATCATGAAGAA
GCTCAGAGTCGAAGGCTTTATCGTGTTCGAGCACTGGCAACACTATGGTGAGTTCGCCAAGCAGATGGGTCAGTGGCTGG
CCAGCGGTAAGGTTAAGGCCGAGCAGACCATCTACGAGGGACTCGACAACGCTCCGGCGGCCTTTATCGGCCTGTTCGAA
GGCAAGAACCGCGGTAAGATGGTGGTTAAGCTGTAG

Protein sequence : 
MQAQEITLASRPEGMPTQANFGLKQVELPALKPGEFLVKNLWMSVDPYMRGRMIDRESYIAPFALGEVLEGGAIGEVIES
NHDGFPVGSKVSSMKGWRSHYVTDGTDHTLLPDTPLSESHFLGVMGMPGMTAWTGLNRIAQLKEGETLFVSAASGAVGSV
ACQLGLLMGAKVVASVGSDEKAEALKAMGIEQVINYKTTPNLSQALKDTAPQGVDVYFENVGGEHLAAALDNMNDHGRIA
VCGMIAQYNDTKPTPGPSNLAYIIMKKLRVEGFIVFEHWQHYGEFAKQMGQWLASGKVKAEQTIYEGLDNAPAAFIGLFE
GKNRGKMVVKL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SH0097 YP_252012.1 hypothetical protein Not tested SCCmec Protein 1e-54 42