Gene Information

Name : Shew_0251 (Shew_0251)
Accession : YP_001092382.1
Strain : Shewanella loihica PV-4
Genome accession: NC_009092
Putative virulence/resistance : Unknown
Product : phage integrase family protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4973
EC number : -
Position : 270161 - 270757 bp
Length : 597 bp
Strand : +
Note : PFAM: phage integrase family protein; KEGG: vvu:VV20655 integrase

DNA sequence :
ATGAGAAAGTTATCTTCGGGAAAATGCAGCGGCATTAAACGACCATTCAAGTTGGAAGAAATTTGGCGAATTAGAACTAG
GCTAGAGCTTGAAAACGACCTAATGCAGCTTGCACTATTGAACTTAGCCATAGATAGCAAGTTGAGAGCGAGTGACTTGC
TAAAGCTACACGTTTACGATGTTTCTTCGCAAGGTGTTATCTATGAAAGGGTTCAGTGCATCCAACAAAAAACGGGGACC
GATGTCCATTATGAGATTACTCCGAGAACACAGCAAAGTATTAGCCGATGGATCTTTTCAGCATCCCTAGAGGCAAGTAG
TTTTCTATTTCCGAGTAGCCGACGCTCAGGGCAGCCTATCAGCTACTCATTCTATCGCTCAATTATCAGAAACTGGGCTG
CAAAACTGGGACTGAATGCTGACTATTATGGAACTCACTCCATGCGTCGAACTAAAGCTACTTTGATCTATGCCAGAACG
AAAAACATTAGGGCGGTTCAGATTCTACTTGGACATTCGAAGGTAGATAACACTATTCGATACCTTGGCGTTGAGCTAGA
AGACGCTCTGAGGCTTTCTGAGAAAACAGACTGCTGA

Protein sequence :
MRKLSSGKCSGIKRPFKLEEIWRIRTRLELENDLMQLALLNLAIDSKLRASDLLKLHVYDVSSQGVIYERVQCIQQKTGT
DVHYEITPRTQQSISRWIFSASLEASSFLFPSSRRSGQPISYSFYRSIIRNWAAKLGLNADYYGTHSMRRTKATLIYART
KNIRAVQILLGHSKVDNTIRYLGVELEDALRLSEKTDC

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAL67363.1 putative recombinase Not tested PAI II CFT073 Protein 3e-35 47