Gene Information

Name : Shew_0244 (Shew_0244)
Accession : YP_001092375.1
Strain : Shewanella loihica PV-4
Genome accession: NC_009092
Putative virulence/resistance : Virulence
Product : 4Fe-4S ferredoxin
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG0437
EC number : -
Position : 261778 - 262473 bp
Length : 696 bp
Strand : +
Note : PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: vvy:VV2222 tetrathionate reductase, subunit B

DNA sequence : 
ATGTTAGATCGGCGCTCGATTTTAAAAATGGCGGCAGGTGGAGCTCTGCTTTCATTGGTGCCCGCCAGCACGCTACAAGC
GAAAACCCTTGGAAAACGCTATGCCATGGTGTTTGACGTTAGACGTTGTACCGGATGTCTCTCTTGTACCGTTTCATGTT
CCGTTGAAAATCAAACCGATGCGGGTCGATGCCGTACCCGCGTCAATCAGGCTAGCCTGAGCTTGGGTGAGCGCATCGCT
ACCCTTGCGGTGCCGAACCAATGTAACCAGTGTGATAATCCTGTCTGCACTCAGGTCTGTCCGGTAGAGGCAACCTACAA
GCGTAAGGAAGATGGCATAGTGGTGATCGACCACGAAGAGTGCATTCACTGCCAGCTGTGTGTCGATGCCTGTCCTTATG
GCGCGCGCCGCAAAGATGAGAGCCTGGATAACCCGCCCGAGAAGTGCAACTTCTGTATTCACCGCGTCACTCAGGGGCTG
TTGCCTGCCTGCGTCGAGACCTGTATCGGCGGCGCCCGTACCTTTGGCGACCTCAACGATCCCGACAGCCAGGTCTCTAA
GCTGGTGCGGGACAACAAGGTCTACGCCATGCTGTCCGAGGCTGGCACCTCGCCCAACATCTTCTACATTGGCTTACCGA
CATCGACCGATGATCAAGCCATTTTGAATCTCAATTACCTCGATTGGCAGCGCTAG

Protein sequence : 
MLDRRSILKMAAGGALLSLVPASTLQAKTLGKRYAMVFDVRRCTGCLSCTVSCSVENQTDAGRCRTRVNQASLSLGERIA
TLAVPNQCNQCDNPVCTQVCPVEATYKRKEDGIVVIDHEECIHCQLCVDACPYGARRKDESLDNPPEKCNFCIHRVTQGL
LPACVETCIGGARTFGDLNDPDSQVSKLVRDNKVYAMLSEAGTSPNIFYIGLPTSTDDQAILNLNYLDWQR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ttrB YP_216393.1 tetrathionate reductase complex subunit B Virulence SPI-2 Protein 4e-43 46
ttrB NP_805056.2 tetrathionate reductase subunit B Virulence SPI-2 Protein 4e-43 46
ttrB CAB37414.1 tetrathionate reductase subunit B (TtrB) Virulence SPI-2 Protein 3e-43 46
ttrB NP_456142.1 tetrathionate reductase subunit B Virulence SPI-2 Protein 4e-43 46
ttrB NP_460350.1 tetrathionate reductase complex subunit B Virulence SPI-2 Protein 4e-43 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Shew_0244 YP_001092375.1 4Fe-4S ferredoxin VFG0486 Protein 2e-43 46