Gene Information

Name : Shew_0220 (Shew_0220)
Accession : YP_001092351.1
Strain : Shewanella loihica PV-4
Genome accession: NC_009092
Putative virulence/resistance : Unknown
Product : phosphoglycolate phosphatase
Function : -
COG functional category : R : General function prediction only
COG ID : COG0546
EC number : 3.1.3.18
Position : 234325 - 235020 bp
Length : 696 bp
Strand : +
Note : KEGG: son:SO0293 phosphoglycolate phosphatase; TIGRFAM: phosphoglycolate phosphatase ; HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase

DNA sequence :
ATGAAAGCCCAATCTATTAAGGCGATCGCCTTCGATCTCGACGGCACGCTTATCGACAGCGTGCCGGATCTGGCCGCCGC
CACCCAAGGCATGCTCGCCGAGCTTGCCTTGCCCCTGTGCGACGAGGAGCAGGTGCGAAGCTGGGTAGGCAATGGCGCCG
CCAAGCTGGTGGAGCGCGCCTTGACCTTCGCCCGCGGTGAGGCGGCAACACAGGCCTATATCGATGCGGCAATGCCGCTG
TTTAGCAAGCATTACGAGGCAAATCTGCAGCAGCACAGCCGCCTCTATGATGGTGTTAAGTCTGTACTCGAGCAGCTGGT
GTCGCTGGGTTACCAACTGGCGATTGTCACCAATAAGCCCTATCGCTTCACCGTGCCTCTGCTGGAGGCCTTCGGCATAG
CTCACCTGTTTAATCAGGTGTTGGGGGGCGATTCGCTGGAGAAGATGAAGCCGGATCCCCTGCCGCTGACGCACCTCAAA
CAGGCATGGCAGCTCGAAGATGAGCAGCTTTTGATGGTGGGTGACTCCCGAAACGATATTTTAGCGGCGAAAGCGGCGGG
TATTTCCTCGATCGGCTTGACCTACGGGTACAACTACGGTGAAGATATTGGGCTCAGCGGCCCGACGGCCGTTTGTAACA
CATTTAGCGAAGTATTGGCGCAGATAACAGATAGCCAAATAGCATTGGAGCAATAA

Protein sequence :
MKAQSIKAIAFDLDGTLIDSVPDLAAATQGMLAELALPLCDEEQVRSWVGNGAAKLVERALTFARGEAATQAYIDAAMPL
FSKHYEANLQQHSRLYDGVKSVLEQLVSLGYQLAIVTNKPYRFTVPLLEAFGIAHLFNQVLGGDSLEKMKPDPLPLTHLK
QAWQLEDEQLLMVGDSRNDILAAKAAGISSIGLTYGYNYGEDIGLSGPTAVCNTFSEVLAQITDSQIALEQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00337 YP_008207802.1 putative phosphatase Not tested AbaR25 Protein 2e-30 41
BJAB0868_00341 YP_008211667.1 putative phosphatase Not tested AbaR26 Protein 2e-30 41