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Name : Shew_2096 (Shew_2096) Accession : YP_001094221.1 Strain : Shewanella loihica PV-4 Genome accession: NC_009092 Putative virulence/resistance : Unknown Product : thiamine biosynthesis protein ThiC Function : - COG functional category : H : Coenzyme transport and metabolism COG ID : COG0422 EC number : - Position : 2422909 - 2424960 bp Length : 2052 bp Strand : - Note : required for the synthesis of the hydromethylpyrimidine moiety of thiamine DNA sequence : ATGTCAACACGTCGTGAAATGCGAGCAGAGGCCCAGGCCTTTATTGATAACCTCAAACCCTTACAACACCCTAATTCGCA AAAATTTTACCTAAACGGCAGCAGGCCGGATCTCAAGGTCGCCATGCGGCAGATCTATCAGTCAGACACCCTGATTGGCG GCACGGCCGAGGCGCCTGTCTATGAGAAGAATCCCCCCATCACAGTCTATGACTGCGCCGGGCCCTATTCAGATCCCGAG GCCGATATCGATGTGCGTCGTGGTCTTGTTAAGCTGCGTAGCGAGTGGATCGCCGAGCGCAGCGATACCCAGGAACTTGA GCAGGTAAGCTCAGGTTTTACCCAGCAGCGTCTGGCCGATGAGGGGCTAGATCATCTGAGGTTTGAGCAACTGCCCAAGC CAAGACGCGCCCTTGAAGGCAGGGTAGTGACTCAGATGCACTACGCCAGACGCGGTATCATCACCCCAGAGATGGAGTAT GTGGCCCTGCGTGAGAATATGGCTCGCGAGACAGTGACCGAAGAGGTGCTCAATCAGCGCGCGCCGGGTGAGAGTTTCGG TGCCAAGCTAGGTGAGCCGATCACGCCGGAGTTTGTGCGTCAGGAGCTGGCGGCGGGCCGGGCAATCTTACCGCTTAACA TAAACCACCCCGAGGCCGAACCTATGATCATCGGCCGAAACTTCCTGGTGAAGGTCAACGCCAACATAGGCAACTCGGCG GTCACCTCATCTATCGAAGAGGAGGTGGAGAAGCTGGTGTGGGCCACCCGTTGGGGCGCGGATACCGTGATGGACCTCTC GACCGGCCGTTATATCCACGAGACCCGCGAGTGGATCATACGTAACTCGCCGGTGCCAATAGGGACTGTGCCCATCTATC AGGCGCTGGAGAAGGTCAATGGCATCGCCGAAGATCTCACCTGGGAGATCTTCAGAGATACCCTGATCGAGCAGGCGGAG CAGGGGGTGGATTACTTTACCATTCACGCCGGCGTGCTTCTGCGTTATGTGCCCATGACGGCCAAACGCCTCACTGGTAT TGTCTCCCGTGGCGGCTCCATCATGGCCAAGTGGTGTCTCTCTCATCACAAGGAAAATTTCCTCTATGAGCACTTTGATG AGATCTGTCAGCTGTGCGCGGCCTATGACGTCTCCCTCTCGCTGGGTGATGGCATGCGTCCAGGCTCCATCGCCGATGCC AACGACGAGGCGCAGTTTGCCGAGCTGGAAACCTTAGGCGAGCTGGTTAAGAAGGCCTGGCAGTATGACGTGCAGACCAT CATCGAAGGGCCGGGTCATATCCCGATGCAGCTTATCAAGGAGAACATGGATAAGCAGCTCGAGCTGTGTGACGAGGCAC CGTTTTATACCCTAGGCCCTCAGACCACCGACATTGCTCCAGGTTATGATCACTTCACCTCAGGCATAGGGGCGGCGATG ATCGCCTGGTATGGCTGCGCAATGCTCTGCTACGTAACGCCCAAGGAACATCTTGGTCTGCCAAACAAGGAAGACGTAAA GCAAGGGCTGATCGCCTATAAGATTGCCGCCCATGCCGGCGATGTCGCCAAGGGGCATCCTGGCGCGCAGATCCGCGACA ACGCCTTGTCTAAGGCGAGGTTCGAGTTCCGCTGGGAAGATCAATACAACCTGGGGCTGGATCCCGATACCGCCAGGGCG TATCACGACGAATCACTTCCGCAGGAGTCGGCCAAGGTCGCGCATTTCTGCTCCATGTGCGGTCCCAAGTTCTGCTCGAT GAAGATCACCCAAGAGGTGCGCGAATACGCTGCGGCCCAAGCGACCGATGTAAGGGAGATTGAGGTTGAGCAGATTGACG TTACTGCTAGCGCGCCGAAGGCAGATATTCAACAAGGGATGGCGCAGATGTCGGCGCAGTTTAAGCAAAGTGGTAGCGAG CTCTATCACAGTGCGATAAGACAAAGCCCTGGCGTTGAAAGCACCTCTCTCGAAAGCACCTCTCTCGAAAGTACCGTTCT TGAAAGTACTTCTCTTGAAAGTACGGCTCTCGAAAAAGCAAAAGAGGTGTAG Protein sequence : MSTRREMRAEAQAFIDNLKPLQHPNSQKFYLNGSRPDLKVAMRQIYQSDTLIGGTAEAPVYEKNPPITVYDCAGPYSDPE ADIDVRRGLVKLRSEWIAERSDTQELEQVSSGFTQQRLADEGLDHLRFEQLPKPRRALEGRVVTQMHYARRGIITPEMEY VALRENMARETVTEEVLNQRAPGESFGAKLGEPITPEFVRQELAAGRAILPLNINHPEAEPMIIGRNFLVKVNANIGNSA VTSSIEEEVEKLVWATRWGADTVMDLSTGRYIHETREWIIRNSPVPIGTVPIYQALEKVNGIAEDLTWEIFRDTLIEQAE QGVDYFTIHAGVLLRYVPMTAKRLTGIVSRGGSIMAKWCLSHHKENFLYEHFDEICQLCAAYDVSLSLGDGMRPGSIADA NDEAQFAELETLGELVKKAWQYDVQTIIEGPGHIPMQLIKENMDKQLELCDEAPFYTLGPQTTDIAPGYDHFTSGIGAAM IAWYGCAMLCYVTPKEHLGLPNKEDVKQGLIAYKIAAHAGDVAKGHPGAQIRDNALSKARFEFRWEDQYNLGLDPDTARA YHDESLPQESAKVAHFCSMCGPKFCSMKITQEVREYAAAQATDVREIEVEQIDVTASAPKADIQQGMAQMSAQFKQSGSE LYHSAIRQSPGVESTSLESTSLESTVLESTSLESTALEKAKEV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00317 | YP_008207782.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR25 | Protein | 0.0 | 68 |
| BJAB0868_00321 | YP_008211647.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR26 | Protein | 0.0 | 68 |
| thiC | YP_001598318.1 | thiamine biosynthesis protein ThiC | Not tested | MDA | Protein | 0.0 | 68 |
