Gene Information

Name : sirA; uvrY (Shew_1824)
Accession : YP_001093949.1
Strain : Shewanella loihica PV-4
Genome accession: NC_009092
Putative virulence/resistance : Virulence
Product : response regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG2197
EC number : -
Position : 2099222 - 2099911 bp
Length : 690 bp
Strand : +
Note : in Escherichia coli the protein UvrY is part of a two-component system along with BarA that is needed for efficient switching between glycolytic and gluconeogenic carbon sources possibly by regulating the Csr system; in Salmonella SirA and BarA regulate v

DNA sequence : 
ATGCCGTCTATGTGGGCCGAGTATGAGCTGAAGGGTAGATTGAAGTTGATTTCTGTATTTTTAGTTGATGACCATGAGTT
AGTAAGAACAGGAATCCGCCGCATCCTAGAGGATGAGCGCGGTATCAAGGTTGTCGGCGAAGCAGGGGATGGCGAATCTG
CCGTGCAGTGGTGCCGTAATAACGAGGCTGACGTGATCCTGATGGACATGAATATGCCTGGCATTGGCGGACTCGAGGCG
ACCCGTAAGATCCTGCGTTATCAGTCCCATGCCAAGATCATCGTCTTGACCATACATACCGAAGATCCTTTCCCGACTAA
GGTGATGCAGGCAGGCGCCTCAGGTTATCTGACCAAGGGCGCGACTCCACCTGAGGTGATACAGGCTATCCGTCAGGTGG
CGCATGGCCAGCGTTATCTGTCGCCGGAGATTGCCCAGCAGATGGCCCTGAGTCAGTTCAACCAGTCGGAAGACAATCCG
TTTAAGTCCTTGTCTGAGCGCGAATTGCAGATCATGATGATGATCACCAATGGCGAACGTGTCAGTGACATCTCTGAGCA
GCTCAACCTGAGCCCCAAGACGGTCAACAGCTATCGTTATCGCTTGTTTGCCAAGCTTGGGATCAGCGGCGATGTCGAGC
TGACCCGATTGGCGATCCGCTACAAGATGTTGGATACCGGCCAGTTCTAG

Protein sequence : 
MPSMWAEYELKGRLKLISVFLVDDHELVRTGIRRILEDERGIKVVGEAGDGESAVQWCRNNEADVILMDMNMPGIGGLEA
TRKILRYQSHAKIIVLTIHTEDPFPTKVMQAGASGYLTKGATPPEVIQAIRQVAHGQRYLSPEIAQQMALSQFNQSEDNP
FKSLSERELQIMMMITNGERVSDISEQLNLSPKTVNSYRYRLFAKLGISGDVELTRLAIRYKMLDTGQF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00302 YP_008207767.1 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Not tested AbaR25 Protein 3e-51 49
BJAB0868_00306 YP_008211632.1 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Not tested AbaR26 Protein 3e-51 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
sirA; uvrY YP_001093949.1 response regulator VFG1889 Protein 1e-52 52