Gene Information

Name : Shew_1603 (Shew_1603)
Accession : YP_001093729.1
Strain : Shewanella loihica PV-4
Genome accession: NC_009092
Putative virulence/resistance : Unknown
Product : 3-oxoacyl-(acyl-carrier-protein) reductase
Function : -
COG functional category : I : Lipid transport and metabolism
COG ID : COG1028
EC number : -
Position : 1835440 - 1836186 bp
Length : 747 bp
Strand : +
Note : TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase; PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: shm:Shewmr7_2466 3-oxoacyl-(acyl-carrier-protein) reductase

DNA sequence : 
ATGAGTTTCAATCTAGATTTAACCGGCAAGGTTGCCCTGGTAACTGGTGCTAGCCGTGGTATTGGCCGTGCGGTCGCCGA
AACATTGGTTGAGGCCGGTGCGCTGGTTATCGGCACCGCGACCAGCGAGCGCGGCGCAGCTGCTATCCAGGAATATCTGG
GTGATAAAGGTCATGGATTAGTATTAAATGTCACCGATAGTGAGTCAATTGACCATTTATTTGCCTCGATCAAAGAAAAA
GTCGGTGAAGTTGATATTCTGGTAAACAATGCGGGTATCACGCGCGACAATCTCTTGATGCGTATGAAGGAAGATGAGTG
GACGGACATCATAGATACCAACCTGACCTCTCTCTATCGCACCTCAAAGCAGGTGTTACGTGCAATGATGAAGAAGCGCA
GTGGCCGTATTATTAACATTGGCTCTGTTGTAGGCACAATGGGCAATGCAGGTCAGACAAACTATTGCGCAGCTAAGGCT
GGTTTGATTGGATTTACAAAATCTCTTGCAAGAGAGGTTGCATCTCGTCAAATAACAGTGAATGCTATTGCTCCTGGGTT
TATCCAGACCGATATGACGGATGAGCTGACGGAAGAGCAGCAAAAAGGTATTATGTCACAAGTTCCTATGGAAAGACTGG
GACAGCCGCAAGAGATTGCAAATGCTGTACTGTTTTTAGCATCGGATTCAGCGGCTTACATCACAGGGGAAACTCTGCAT
GTAAACGGCGGCATGTACATGGTTTAA

Protein sequence : 
MSFNLDLTGKVALVTGASRGIGRAVAETLVEAGALVIGTATSERGAAAIQEYLGDKGHGLVLNVTDSESIDHLFASIKEK
VGEVDILVNNAGITRDNLLMRMKEDEWTDIIDTNLTSLYRTSKQVLRAMMKKRSGRIINIGSVVGTMGNAGQTNYCAAKA
GLIGFTKSLAREVASRQITVNAIAPGFIQTDMTDELTEEQQKGIMSQVPMERLGQPQEIANAVLFLASDSAAYITGETLH
VNGGMYMV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAT96098.1 putative short-chain type regulator dehydrogenase Not tested T-PAI Protein 3e-34 42
unnamed AAT96175.1 putative short-chain type regulator Not tested T-PAI Protein 2e-34 42
unnamed AAT96227.1 putative short-chain type regulator Not tested T-PAI Protein 2e-34 42
unnamed AAT96054.1 putative short-chain type regulator Not tested T-PAI Protein 1e-34 42
unnamed AAT96115.1 putative short-chain type regulator Not tested T-PAI Protein 5e-35 41