|
Name : Shew_1515 (Shew_1515) Accession : YP_001093641.1 Strain : Shewanella loihica PV-4 Genome accession: NC_009092 Putative virulence/resistance : Unknown Product : Na+/H+ antiporter NhaC Function : - COG functional category : R : General function prediction only COG ID : COG2056 EC number : - Position : 1737706 - 1739025 bp Length : 1320 bp Strand : - Note : PFAM: Gluconate transporter; Citrate transporter; Na+/H+ antiporter NhaC; TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: she:Shewmr4_2377 Na+/H+ antiporter NhaC DNA sequence : ATGAATGCAGTTGTTATTGCCGTTTGCTTGATGTTGGGCCTTAGCCTTGCCCGGGTAAACGTCGTTATCGCACTCACCGT GAGTGCATTGGTCGCCGGACTCGTCGGCGGCATGAACCTAGATCAGACGGTCGACGCCTTTAATACCGGCCTTGGCGGCG GCGCGCAGATCGCCCTGAGCTATGCCCTGTTGGGCGCCTTTGCCGTGGCCCTGTCACACTCGGGACTCACCACGCTTATC TCCCGCAAGGTGATCGCCCAGTTAGGACAAGAAGAAAGCCCTGGCAACGTCAACAAGGTGCGCTGGTTCCTCTTGCTGGC TATCCTGGCCATGGCGGTATCGTCACAAAACATTCTGCCGATTCATATTGCCTTCATTCCGATCTTAATTCCGCCGCTGT TGCATGTGATGTCTAAGCTCAAGCTCGACCGACGTCTGGTGGCCTGTGTGCTCACCTTCGGCCTAGTGACCACCTATATG ATCCTGCCCGTGGGTTTTGGTGGTATCTTCCTCAACGACATCTTGCTCTCTAACCTCACCAGCAACAACTTAGATGCGGT GCGCGAGCAGATCCCATCGGCCATGTTAATCCCGGCCCTAGGCATGGTGGTGGGGCTATTCATCGCCGTATTCATCAGCT ATCGCAAGCCAAGAGAGTATAAAGAAGAGTTGATCCTCGCCGCCGAGCCGGAGGAGACCCTCAATCGCCGTAACATCATC ATCGCCCTGGTCGCTATTGCCTCTACCCTAGCGGTGCAGCTCTATACCGGCTCGATGATCTTCGGCGCCCTCATCGGCTT TATCATCTTTAGCTTCTCTGGCGCCCTCAAGCATGTGGCCGATCAGGATATCTTTAACCAAGGCGTACGCATGATGGCCA ACATAGGTTTCATCATGATCTCGGCCGCCGGTTTCGCCGCCGTGGTCAAGGCCACAGGCGACGTGGGCACCCTGGTTGAT TCCCTCAGCCATCTCATCGGTGACAACCGCGCCTTGGCGGCCTTCTTGATGTTGGTGGTCGGGCTGCTCATCACCATGGG AATCGGCTCATCGTTTTCCACCATCCCGATTATTGCCACCATCTATGTGCCGCTGGCCATCAGCTTCGGCTTCTCGGTAC CGGCCACCATAGCGCTTGTCGGCACGGCTGCGGCGCTGGGTGATGCGGGCTCACCGGCTTCGGATTCGACCCTGGGCCCA ACGGCCGGTCTTAACGCCGACGGTCAGCATGATCACATTCGTGACAGCGTGATCCCAACCTTTATCCACTACAACATCCC CTTGTTGATCTCGGGTTGGATAGCGGCCATGGTGCTTTAG Protein sequence : MNAVVIAVCLMLGLSLARVNVVIALTVSALVAGLVGGMNLDQTVDAFNTGLGGGAQIALSYALLGAFAVALSHSGLTTLI SRKVIAQLGQEESPGNVNKVRWFLLLAILAMAVSSQNILPIHIAFIPILIPPLLHVMSKLKLDRRLVACVLTFGLVTTYM ILPVGFGGIFLNDILLSNLTSNNLDAVREQIPSAMLIPALGMVVGLFIAVFISYRKPREYKEELILAAEPEETLNRRNII IALVAIASTLAVQLYTGSMIFGALIGFIIFSFSGALKHVADQDIFNQGVRMMANIGFIMISAAGFAAVVKATGDVGTLVD SLSHLIGDNRALAAFLMLVVGLLITMGIGSSFSTIPIIATIYVPLAISFGFSVPATIALVGTAAALGDAGSPASDSTLGP TAGLNADGQHDHIRDSVIPTFIHYNIPLLISGWIAAMVL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB0868_00356 | YP_008211682.1 | putative permease | Not tested | AbaR26 | Protein | 2e-106 | 58 |
| BJAB07104_00352 | YP_008207817.1 | putative permease | Not tested | AbaR25 | Protein | 2e-106 | 58 |
| CpC231_1474 | YP_005683838.1 | Na+/H+ antiporter NhaC | Not tested | PiCp 5 | Protein | 2e-99 | 57 |
| CpI19_1481 | YP_005685924.1 | Na+/H+ antiporter NhaC | Not tested | PiCp 5 | Protein | 2e-99 | 57 |
| Cp1002_1472 | YP_005681739.1 | Na+/H+ antiporter NhaC | Not tested | PiCp 5 | Protein | 1e-99 | 57 |
| cpfrc_01481 | YP_003783881.1 | hypothetical protein | Not tested | PiCp 5 | Protein | 1e-99 | 57 |
