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Name : Shew_0146 (Shew_0146) Accession : YP_001092277.1 Strain : Shewanella loihica PV-4 Genome accession: NC_009092 Putative virulence/resistance : Unknown Product : NusG antitermination factor Function : - COG functional category : K : Transcription COG ID : COG0250 EC number : - Position : 162755 - 163297 bp Length : 543 bp Strand : + Note : KEGG: sfr:Sfri_0136 NusG antitermination factor; TIGRFAM: transcription termination/antitermination factor NusG; PFAM: transcription antitermination protein NusG; KOW domain protein; SMART: NGN domain protein; KOW (Kyrpides, Ouzounis, Woese) domain protei DNA sequence : ATGACTGAAGCTAAAAAAAGATGGTATGTGGTTCAGGCCTTTTCGGGTTATGAAGGTCGTGTATGCAAATCATTGCTTGA ACACATCAAAATGCACGGCATGGAGCATTACTTCGGCGAGGTACTAGTACCTACCGAGGAAGTGGTTGAGATGCGTGCAG GCCAGCGTCGTAAGAGCGAGCGTAAGTTCTTCCCTGGCTATGTGTTGGTACAGATGGAAATGAACGATGAAAGCTGGCAC TTGGTGAAGAGCATCCCTCGTGTGATGGGCTTTATCGGTGGCACCTCTGATCGTCCAGCGCCTATCTCTGATCGCGAAGC CGATGCGATTCTGCAGCGTCTACAAGAGACGACAGAGTCTCCGACTCATCGCGTGATGTTCGAGCCTGGTGAAGTGGTTC GCGTAACCGACGGTCCTTTTGCCGACTTTAACGGCACCGTTGAAGAGGTCGACTACGAGAAGAACCGCGTTAAGGTGTCT GTAATGATCTTCGGTCGTTCAACACCTGTAGAGCTAGATTTCAGCCAGATCGAAAAAAGCTGA Protein sequence : MTEAKKRWYVVQAFSGYEGRVCKSLLEHIKMHGMEHYFGEVLVPTEEVVEMRAGQRRKSERKFFPGYVLVQMEMNDESWH LVKSIPRVMGFIGGTSDRPAPISDREADAILQRLQETTESPTHRVMFEPGEVVRVTDGPFADFNGTVEEVDYEKNRVKVS VMIFGRSTPVELDFSQIEKS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00341 | YP_008207806.1 | Transcription antiterminator | Not tested | AbaR25 | Protein | 3e-56 | 60 |
| BJAB0868_00345 | YP_008211671.1 | Transcription antiterminator | Not tested | AbaR26 | Protein | 3e-56 | 60 |
