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Name : Shew_1478 (Shew_1478) Accession : YP_001093604.1 Strain : Shewanella loihica PV-4 Genome accession: NC_009092 Putative virulence/resistance : Virulence Product : hypothetical protein Function : - COG functional category : S : Function unknown COG ID : COG3272 EC number : - Position : 1703136 - 1704080 bp Length : 945 bp Strand : + Note : PFAM: protein of unknown function DUF523; Protein of unknown function DUF1722; KEGG: cps:CPS_1379 hypothetical protein DNA sequence : ATGAAGAAGAAATTGAAGATCGGCATCAGTGCCTGTGTGATGGGCGAGCCGGTGCGTTTCGACAGAGGTCATAAGAAATC GGGCTTCTGTATGGAGCAGCTGGCGGAGTTTGCCGAGTTTAAACCTGTGTGTCCCGAGATGGCCATCGGCCTGCCGGTGC CGCGCCCGACCATCAGGCAGATAGTGCGGGACAACATCATTACCGTGTCCCGCCCCGACGGCAGCGGCGATGTGACCCAG GCCCTTAAAGAGTTCGGCGCTAAGGCCGCCCTGAACTATCAGGAGCTGGCGGGTTTCGTGTTTTGCGCCAAGAGCCCCAG CTGCGGCATGGAGCGGGTCAAGGTGTATCATCACCACGGTAAGGGCTCAGAGTCCACCGGCGTCGGCATCTTCGCCGAGC AGGTGATGAAGGCCAATCCGCTCTTGCCCTGCGAGGAGAATGGTAGGCTGAACGACCCCATCATTCGCGAAAACTTCACC ACCCGCATCTTCACCTATCAGAAGTGGCTGGATCTCAAGGCGGAGGGGCTGACCCGGCACAAGTTGATCCAGTTCCATAG CGCCCACAAGTATCTGGTGATGAGCCACCATGTCGAGAGCTATCGCGAGCTTGGACGTCTGTTGGGCCGCGCCGACATTG GCCTCGAGGAGCAGAGTGAGCGTTATATCTCGGGTCTGATGCAGGCGCTTAAACATAAGGCGTCCCGTCGCAGTCATACC AACACACTGCAACATCTGCAGGGCTACTTTAAGCGTCAGCTTGACGAGCATAAGCGCCGCGAGCTGACCCAGGAGATCGC CGCCTATCGCGAGGGGCTGTCGCCGCTCCTAGTGCCGCTGACCCTGATAAAACATTATCTTATTGAGTTTCCAAATGAAT ACCTGCTACAGCAGGCCTATCTGAACCCCCATCCCAAGGAGCTGAGATTGAGGTACGGCTATTGA Protein sequence : MKKKLKIGISACVMGEPVRFDRGHKKSGFCMEQLAEFAEFKPVCPEMAIGLPVPRPTIRQIVRDNIITVSRPDGSGDVTQ ALKEFGAKAALNYQELAGFVFCAKSPSCGMERVKVYHHHGKGSESTGVGIFAEQVMKANPLLPCEENGRLNDPIIRENFT TRIFTYQKWLDLKAEGLTRHKLIQFHSAHKYLVMSHHVESYRELGRLLGRADIGLEEQSERYISGLMQALKHKASRRSHT NTLQHLQGYFKRQLDEHKRRELTQEIAAYREGLSPLLVPLTLIKHYLIEFPNEYLLQQAYLNPHPKELRLRYGY |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| orf319 | NP_460354.1 | inner membrane protein | Not tested | SPI-2 | Protein | 1e-70 | 47 |
| STY1731 | NP_456139.1 | putative pathogenicity island protein | Not tested | SPI-2 | Protein | 8e-71 | 47 |
| t1257 | NP_805060.1 | pathogenicity island protein | Not tested | SPI-2 | Protein | 8e-71 | 47 |
| SC1410 | YP_216397.1 | inner membrane protein | Not tested | SPI-2 | Protein | 5e-71 | 47 |
| ORF 319 | CAB37410.1 | - | Not tested | SPI-2 | Protein | 8e-71 | 47 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Shew_1478 | YP_001093604.1 | hypothetical protein | VFG0490 | Protein | 4e-71 | 47 |
