Gene Information

Name : Shew_1434 (Shew_1434)
Accession : YP_001093560.1
Strain : Shewanella loihica PV-4
Genome accession: NC_009092
Putative virulence/resistance : Virulence
Product : UTP-glucose-1-phosphate uridylyltransferase GalU
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG1210
EC number : 2.7.7.9
Position : 1648633 - 1649553 bp
Length : 921 bp
Strand : -
Note : KEGG: son:SO1665 UTP--glucose-1-phosphate uridylyltransferase; TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase; PFAM: Nucleotidyl transferase

DNA sequence : 
ATGAAACAGCACAAAGTTCGCAAGGCCGTTATTCCCGTCGCGGGTCTCGGCACTCGCATGCTTCCGGCAACCAAGGCGAT
CCCCAAGGAGATGTTGCCCATAGTCGATAGACCCTTGATCCAATACGTGGTCAACGAGGCGATAGCCGCCGGGATCAATG
AGATAGTCCTGGTCACCCATGCCAGTAAGAACTCCATCGAAAACCATTTCGACTCCAGCTTCGAGCTCGAGGCTCAGCTC
GAACGCAGGGTAAAGCGTCAGCTACTGGCCGAGGTGCAGGCCATCTGCCCAAGCGACGTGACAGTGATCAGCGTGCGCCA
ATCTCAGGCCAAGGGGCTGGGCCACGCCATCTTATGTGCCCAAAAGGTCGTGGGCGACGAGCCCTTTGCGGTCCTGCTGC
CGGACGTCATCATAGACGATGCCAGCTGCGATCTCAGCCGGGATAACTTGGCCGAGATGATCAAGCTGTTTGACGAAACC
GAAGTGGGCCAGATCATGGTCGAGGGCGTGCCAGAGAGCAGCGTCGACCAGTATGGTATCGCCGATGTGAACGGCCATCA
GCTGGAGGCCGGGCAATCTAAACCTATCAATGAGTTGGTGGAGAAACCTAAGGTGGGCCAGGCGCCATCTAACTTAGCGG
TAGTTGGCCGATACGTGCTACCTAAGCAGATCTGGCAGCTACTGGGCAAGACCCCCGCCGGCGCAGGCGATGAGATCCAA
CTTACCGATGCCATCGCCATGTTGATGAACACTCAAACCGTCAACGCCTATTACATGCATGGCAAGAGCCATGACTGTGG
CAACAAACTCGGCTACATGCGCGCCAATGTCGAATACGCGCTGCGCCATCACGAAGTGGGCAGGGATTTTGCCGACTACC
TCAAGACATTAGTTTCAGATTTACAACAGGATAAAGATTAA

Protein sequence : 
MKQHKVRKAVIPVAGLGTRMLPATKAIPKEMLPIVDRPLIQYVVNEAIAAGINEIVLVTHASKNSIENHFDSSFELEAQL
ERRVKRQLLAEVQAICPSDVTVISVRQSQAKGLGHAILCAQKVVGDEPFAVLLPDVIIDDASCDLSRDNLAEMIKLFDET
EVGQIMVEGVPESSVDQYGIADVNGHQLEAGQSKPINELVEKPKVGQAPSNLAVVGRYVLPKQIWQLLGKTPAGAGDEIQ
LTDAIAMLMNTQTVNAYYMHGKSHDCGNKLGYMRANVEYALRHHEVGRDFADYLKTLVSDLQQDKD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSP0059 YP_300149.1 UTP-glucose-1-phosphate uridylyltransferase Not tested SCC15305cap Protein 3e-55 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Shew_1434 YP_001093560.1 UTP-glucose-1-phosphate uridylyltransferase GalU VFG0964 Protein 1e-59 44