Gene Information

Name : Shew_1418 (Shew_1418)
Accession : YP_001093545.1
Strain : Shewanella loihica PV-4
Genome accession: NC_009092
Putative virulence/resistance : Virulence
Product : UTP-glucose-1-phosphate uridylyltransferase GalU
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG1210
EC number : -
Position : 1631972 - 1632892 bp
Length : 921 bp
Strand : +
Note : TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase; PFAM: Nucleotidyl transferase; KEGG: sfr:Sfri_2823 UTP-glucose-1-phosphate uridylyltransferase

DNA sequence : 
ATGGGGGGTTGTCTGTTTTATCATATTGGATTTTTTATGAAAGTTGTTATTCCTGTTGCAGGTCTTGGCACGCGCATGTT
GCCTGCAACCAAAGCCATACCGAAAGAGATGTTGCCGCTAGTTGACAAGCCACTCATTCAATATATTGTTAACGAGTGCG
TATCAGCTGGTGTGAAAGAGATTGTATTGGTAACTCATGCGAGTAAGAATGCTATCGAGAACCATTTTGATACTTCCTAT
GAACTTGAGTCTACGCTTGAGAAGCGTGTAAAGCGTCAGTTACTGGACGAGGTGCAATCAATTTGCCCCAAAGATGTGAC
CATCATGCACGTGCGCCAAGGCGAGGCTAAGGGGCTTGGTCATGCCGTACTTTGTGCTAAACCTTGTATTGGCAATAACC
CTTTCGCTGTCGTATTGCCGGATGTGATCTTAGATGAGTACAGTGCCGATCAAAGCTCAGAAAACCTTGCGGCAATGATT
AAACATTATAAAGCGACTCAAGCTAGCCAAATCATGGTAGCGCCAGTGGCTCTAGATGAAGTTAACAAGTACGGAATTGC
CGATTGCGGCGGAGTGAATATCGAACCTGGTGAATCATCAGTTATTAAGGCTATGGTTGAAAAGCCTGCTATTGATGAAG
CCCCGTCTAATCTTGCTGTTGTAGGTCGTTACGTTTTGTCTGAAAAAATCTGGGACTTGCTGGCTAAAACCCCTGCTGGT
GCAGGGGATGAAATCCAATTGACAGACGCAATCGACATGTTGATTGAATCTGACACTGTCGAAGCCTTCAATATGACAGG
TAAGTCTCACGATTGTGGCGACAAGCTTGGTTATATGGCAGCCTTTGTTGAATACGGCCTGCGTAATGAAAAGCTGGGTA
AAGAGTTTCGTCAGCAGTTAGATAACCTGCTAGCACAATAA

Protein sequence : 
MGGCLFYHIGFFMKVVIPVAGLGTRMLPATKAIPKEMLPLVDKPLIQYIVNECVSAGVKEIVLVTHASKNAIENHFDTSY
ELESTLEKRVKRQLLDEVQSICPKDVTIMHVRQGEAKGLGHAVLCAKPCIGNNPFAVVLPDVILDEYSADQSSENLAAMI
KHYKATQASQIMVAPVALDEVNKYGIADCGGVNIEPGESSVIKAMVEKPAIDEAPSNLAVVGRYVLSEKIWDLLAKTPAG
AGDEIQLTDAIDMLIESDTVEAFNMTGKSHDCGDKLGYMAAFVEYGLRNEKLGKEFRQQLDNLLAQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSP0059 YP_300149.1 UTP-glucose-1-phosphate uridylyltransferase Not tested SCC15305cap Protein 4e-51 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Shew_1418 YP_001093545.1 UTP-glucose-1-phosphate uridylyltransferase GalU VFG0964 Protein 7e-54 41