Gene Information

Name : Shew_1269 (Shew_1269)
Accession : YP_001093398.1
Strain : Shewanella loihica PV-4
Genome accession: NC_009092
Putative virulence/resistance : Unknown
Product : cyclase/dehydrase
Function : -
COG functional category : I : Lipid transport and metabolism
COG ID : COG2867
EC number : -
Position : 1468162 - 1468593 bp
Length : 432 bp
Strand : +
Note : PFAM: cyclase/dehydrase; KEGG: shm:Shewmr7_2853 cyclase/dehydrase

DNA sequence :
ATGCCCAAGATTTCCCGTAGCGTATTAGTGCGCTTTAGTGCCATGCAGATGTACGAGTTAGTCAACGATGTGGAGTCCTA
TAAGGAGTTTCTGCCGGGTTGTGTTGGCGGTAAGGTACTTGAGTTTGATGGTAAGACCATGGTGGCCTCGGTCGATGTCT
CCAAGGCGGGGATCAGCAAGACCTTTACCACACGCAATCAGGTTATTCCTGGTAAGCGGATTGAACTGGCGCTGGAAAAC
GGCCCCTTTAAGCATCTGCACGGCCAATGGGAGTTTACCGAGCTGACGGAAGATGCCTGTAAGGTGGATTTCGAGCTCAA
CTTCGAGTTTTCCAGTTCGATAGCGGATCTGGCCTTCGGTAAGGTGTTCAAAGAGTTGATGTCTTCTATGGTGACCGCCT
TCACCAGCCGCGCCAAAGTGATTTATAAATAA

Protein sequence :
MPKISRSVLVRFSAMQMYELVNDVESYKEFLPGCVGGKVLEFDGKTMVASVDVSKAGISKTFTTRNQVIPGKRIELALEN
GPFKHLHGQWEFTELTEDACKVDFELNFEFSSSIADLAFGKVFKELMSSMVTAFTSRAKVIYK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAA82716.1 - Not tested VPI Protein 3e-39 64