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Name : Shew_1258 (Shew_1258) Accession : YP_001093387.1 Strain : Shewanella loihica PV-4 Genome accession: NC_009092 Putative virulence/resistance : Virulence Product : phage transcriptional regulator AlpA Function : - COG functional category : K : Transcription COG ID : COG3311 EC number : - Position : 1454598 - 1454783 bp Length : 186 bp Strand : + Note : PFAM: Prophage CP4-57 regulatory; KEGG: ilo:IL0640 predicted transcriptional regulator DNA sequence : ATGAAACTCATTAAACTTAAAGAAGTACTGGAAATGACCAGTTTAAGCAAAGCGACTCTTTATCGGATGATTAAGCTGGG TGCATTCCCTGAGCAGCTATCGATTGGAGGGAGGGCTGTTGCGTGGGTCGAAGACGAAGTGCTCAACTGGATTGAAGAGC GAATCGCTGCCAGAGATGCGTGCTAA Protein sequence : MKLIKLKEVLEMTSLSKATLYRMIKLGAFPEQLSIGGRAVAWVEDEVLNWIEERIAARDAC |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| VC1809 | NP_231443.1 | transcriptional regulator | Not tested | VPI-2 | Protein | 2e-13 | 56 |
| VC0395_A1406 | YP_001217349.1 | transcriptional regulator | Not tested | VPI-2 | Protein | 2e-13 | 56 |
| VPI2_0041 | ACA01856.1 | predicted transcriptional regulator | Not tested | VPI-2 | Protein | 1e-13 | 56 |
| VC0395_A1382 | YP_001217325.1 | transcriptional regulator | Not tested | VPI-2 | Protein | 1e-10 | 50 |
| VPI2_0033 | AAX20900.1 | transcriptional regulator | Not tested | VPI-2 | Protein | 1e-10 | 50 |
| VC1785 | NP_231420.1 | transcriptional regulator | Not tested | VPI-2 | Protein | 1e-10 | 50 |
| VC0497 | NP_230151.1 | transcriptional regulator | Not tested | VSP-2 | Protein | 1e-10 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Shew_1258 | YP_001093387.1 | phage transcriptional regulator AlpA | VFG1141 | Protein | 5e-14 | 56 |
| Shew_1258 | YP_001093387.1 | phage transcriptional regulator AlpA | VFG1118 | Protein | 4e-11 | 50 |
