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Name : lspA (Shew_1100) Accession : YP_001093230.1 Strain : Shewanella loihica PV-4 Genome accession: NC_009092 Putative virulence/resistance : Unknown Product : lipoprotein signal peptidase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0597 EC number : 3.4.23.36 Position : 1269903 - 1270415 bp Length : 513 bp Strand : + Note : lipoprotein signal peptidase; integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis DNA sequence : ATGCCATCTAGCTGGAAAGAGAGTGGCTTACGTTGGTATTGGGTAGTTGTATTGGTGTTCGTCGCCGATCAACTATCCAA ACAATGGGTACTAGCCAATTTTGACCTGAGAGAGTCAATCAACTTACTGCCATTTTTTAATTTCACCTATGTGAGAAATT ATGGTGCCGCCTTTAGCTTTCTAAATGATGCCGGTGGGTGGCAGCGTTGGCTGTTTACCTTGGTTGCCGTCGGCTTTAGT ACCTTGCTGACCGTCTGGCTGCGTAAGCAACCGAAAGGATTATGGCGACTGAATCTGGCCTATACCTTAGTGATTGGTGG GGCGCTGGGGAATTTAATTGATCGCTTGCAACATGGCTTTGTGGTCGATTTTCTCGACTTTTATTGGAAGACGAGCCATT TCCCCGCCTTCAACATTGCCGATTCGGCGATCTGTGTCGGTGCTGGACTCATCATCTTGGATTCGTTTATTTCAGAGCGT AAGCCAAATGGCGAAGACGTTGCAAAGGGGTAA Protein sequence : MPSSWKESGLRWYWVVVLVFVADQLSKQWVLANFDLRESINLLPFFNFTYVRNYGAAFSFLNDAGGWQRWLFTLVAVGFS TLLTVWLRKQPKGLWRLNLAYTLVIGGALGNLIDRLQHGFVVDFLDFYWKTSHFPAFNIADSAICVGAGLIILDSFISER KPNGEDVAKG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| lspA | CAJ77023.1 | lipoprotein signal peptidase | Not tested | AbaR1 | Protein | 1e-14 | 45 |
| lspA | ACS32043.1 | lipoprotein signal peptidase | Not tested | AbaR5 | Protein | 1e-14 | 45 |
| lspA | ADI24143.1 | lipoprotein signal peptidase | Not tested | AbaR1 | Protein | 8e-15 | 44 |
| lspA | AAN62189.1 | putative lipoprotein signal peptidase LspA | Not tested | PAGI-2(C) | Protein | 2e-19 | 42 |
| lspA | ACN81031.1 | lipoprotein signal peptidase | Not tested | AbaR5 | Protein | 2e-16 | 41 |
| lspA | CAJ77096.1 | Lipoprotein signal poeptidase | Not tested | AbaR1 | Protein | 2e-16 | 41 |
| lspA | ADZ05771.1 | lipoprotein signal peptidase | Not tested | AbaR11 | Protein | 2e-16 | 41 |
| lspA | AGK36655.1 | lipoprotein signal peptidase | Not tested | AbaR26 | Protein | 2e-16 | 41 |
| ACICU_00236 | YP_001844895.1 | lipoprotein signal peptidase | Not tested | AbaR20 | Protein | 2e-16 | 41 |
