Gene Information

Name : Shew_0991 (Shew_0991)
Accession : YP_001093121.1
Strain : Shewanella loihica PV-4
Genome accession: NC_009092
Putative virulence/resistance : Unknown
Product : resolvase domain-containing protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1961
EC number : -
Position : 1147126 - 1147743 bp
Length : 618 bp
Strand : -
Note : PFAM: Resolvase, N-terminal domain; Resolvase helix-turn-helix domain protein; KEGG: psb:Psyr_2668 helix-turn-helix, fis-type

DNA sequence :
ATGAAGATTGGATATGTCCGAGTTTCTAAGTCTGATGGCTCTCAAGTCTTGGATTTGCAAGAGGATGCTATGCGGGCTTT
GGACATAGACCCATCCAATATCTACTACGACCGGCTATCTGGTAAGAAGGATAGCCGCCCGGGACTTGACGCTTGCCTTA
AAGCTCTACGGGAGGGGGACACACTTGTTGTATGGAAGCTCGACCGACTGGGGCGCAATCTCACACACCTTGTAAATACG
GTTCAGGGATTAAACGATCGAGGGGTTGGCCTCAAGGTGATCAGCGGCCAAGGGGCAGACATCGACACCTCCACTGCCGC
AGGTAAGATGATTTTCGGGATATTTGCTGCGTTGGCTGAATTCGAGCGCGAACTGATTAGGGAACGGACTCTAGCCGGAC
TCAGCGCCGCTCGTGCAAGAGGCAAAAAGGGTGGCCGCAGGCATCAGTTGACCAAGAGCCAGGTTCGTTTGGCTCAGGCG
TCAATGCAGCACCGGGATACGAACGTTTCGGAATTGTGCCGTGAACTGGGAGTATCTAGACAGACCCTGTATCGTTATGT
CAGCCCGAAAGGTGAACTGAGAGACTACGGGAAACAAGTCATTGAGGGCAGGCAATAG

Protein sequence :
MKIGYVRVSKSDGSQVLDLQEDAMRALDIDPSNIYYDRLSGKKDSRPGLDACLKALREGDTLVVWKLDRLGRNLTHLVNT
VQGLNDRGVGLKVISGQGADIDTSTAAGKMIFGIFAALAEFERELIRERTLAGLSAARARGKKGGRRHQLTKSQVRLAQA
SMQHRDTNVSELCRELGVSRQTLYRYVSPKGELRDYGKQVIEGRQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ABTW07_3871 YP_005797119.1 resolvase IS26 Not tested AbaR4e Protein 4e-61 70
tnpR ACN81015.1 TnpR resolvase Not tested AbaR5 Protein 4e-61 70
1_318 CAJ77076.1 Resolvase Not tested AbaR1 Protein 3e-61 70
res AGK06929.1 resolvase Not tested SGI1 Protein 2e-30 53
res AGK06966.1 resolvase Not tested SGI1 Protein 2e-30 53
res AGK07012.1 resolvase Not tested SGI1 Protein 2e-30 53
res AGK07070.1 resolvase Not tested SGI1 Protein 2e-30 53
res AAK02044.1 resolvase Not tested SGI1 Protein 2e-30 53
tnpR ACD85600.1 TnpR resolvase Not tested SGI2 Protein 2e-30 53
res AGF34985.1 resolvase Not tested SGI1 Protein 2e-30 53
res AGF35025.1 resolvase Not tested SGI1 Protein 2e-30 53
res AGF35059.1 resolvase Not tested SGI1 Protein 2e-30 53
CDBH8_0918 YP_005160010.1 transposase-like protein Not tested Not named Protein 2e-20 46
binR YP_254224.1 resolvase/integrase BinR Not tested ¥ðSh1 Protein 5e-26 45
binL YP_254524.1 DNA-invertase Not tested ¥ðSh2 Protein 3e-26 45
SH1761 YP_253676.1 DNA-invertase Not tested ¥ÕSh1 Protein 3e-26 45