Gene Information

Name : P9301_06271 (P9301_06271)
Accession : YP_001090851.1
Strain : Prochlorococcus marinus MIT 9301
Genome accession: NC_009091
Putative virulence/resistance : Virulence
Product : ABC transporter substrate-binding protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0803
EC number : -
Position : 555485 - 556393 bp
Length : 909 bp
Strand : +
Note : COG803 ABC-type metal ion transport system, periplasmic component/surface adhesin [Inorganic ion transport and metabolism]

DNA sequence :
ATGTTAAATATGAAAAAAAATATTCTTTTTTTAAGTTTGATAATTCTGCTTTCTATTGCTTCAGGCTCATGTAAGAGAAT
ATCAAATAAAAATGAAACTAAAGAAGTAATACTGGCAAGTTTCACTGTTTTGGCGGATATAATTAGTAATATCGCTAAAG
ATGATTTTATTGTTAGATCAATAACGAAACCTGGAGTTGAAGTTCATGGCTACCAACCAACTCCAAGCGATTTGGTAAAT
GCCTCTAGTGCTTTTGTTTTTATTGATAATGGATTTGGATTTGAATTATGGGCTGAAAAATTTGTTTCTAATTTAAAAGT
TAAAAGAATTACTGTCGCGGAATATTTGGATCCTATTTTTATAAGTGAAGATTTTTATAAAGGGAAACCCAATCCTCATG
CCTGGATTTCTCCAAAAAGAGGGATTCTATACGTAGATATTATCGTGGATTCTTTATCAGAATTGAGGCCATCCAAAAGG
ACATTATTTGAAGAAAATGGAAAAATTTATAAAGATAAACTATCTAAAATAGATAAAGAATTCTCACTTTTTATTAATAA
CTTAAATAAAGACAGGAGGTATCTAGTAAGTTGTGAAGGGGCTTTTTCGTATCTAACAAATGATTATGGATTAAAAGAAG
TTTATTTGTGGCCAGTTAATGCTGAGAGTCAAATTACTCCCAAAAGCATGGCAAGAACAATCTCGCTTGTTAAAGAAAAA
AATGTTCCATCTGTATTTTGCGAAAGTACTGTAAGTAACGAATCTCAAATGGTAGTTGCAAACGAAACTGGGGCTAATTT
TGGAGGAAGTCTTTTTGTTGATTCATTATCTGATGATAGTGGGCCTGCAAGTTCCTATATGAAAATGCTTGAGCATAATT
TGGAATTGATAAAAAAAGGGCTTTTTTAA

Protein sequence :
MLNMKKNILFLSLIILLSIASGSCKRISNKNETKEVILASFTVLADIISNIAKDDFIVRSITKPGVEVHGYQPTPSDLVN
ASSAFVFIDNGFGFELWAEKFVSNLKVKRITVAEYLDPIFISEDFYKGKPNPHAWISPKRGILYVDIIVDSLSELRPSKR
TLFEENGKIYKDKLSKIDKEFSLFINNLNKDRRYLVSCEGAFSYLTNDYGLKEVYLWPVNAESQITPKSMARTISLVKEK
NVPSVFCESTVSNESQMVVANETGANFGGSLFVDSLSDDSGPASSYMKMLEHNLELIKKGLF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitA NP_806464.1 iron transporter periplasmic-binding protein Virulence SPI-1 Protein 2e-52 42
sitA NP_461782.1 periplasmic binding protein Virulence SPI-1 Protein 2e-52 42
sitA AAD41065.1 SitA Virulence centisome 63 pathogenicity island Protein 1e-52 42
sitA YP_217781.1 iron transporter: fur regulated Virulence SPI-1 Protein 2e-52 42
sitA NP_457255.1 Iron transport protein, periplasmic-binding protein Virulence SPI-1 Protein 2e-52 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
P9301_06271 YP_001090851.1 ABC transporter substrate-binding protein BAC0349 Protein 8e-53 42
P9301_06271 YP_001090851.1 ABC transporter substrate-binding protein BAC0439 Protein 4e-53 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
P9301_06271 YP_001090851.1 ABC transporter substrate-binding protein VFG0525 Protein 7e-53 42