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Name : rplS (P9301_05001) Accession : YP_001090724.1 Strain : Prochlorococcus marinus MIT 9301 Genome accession: NC_009091 Putative virulence/resistance : Unknown Product : 50S ribosomal protein L19 Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0335 EC number : - Position : 436257 - 436736 bp Length : 480 bp Strand : - Note : this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site DNA sequence : ATGACCAAAATGGCCAAAGAGAAACAAGAGAAGGATTTAGAAACCGGTATTAAAGCTGGAGCATCAGTTGATGTGGCAGT TGAACAAAAAGAAAAAAATACGGTTTCTGAGACTACGCAAACCTTAAGCGCATCCAATCTTATTAAGGAATTTGAGAACG AACAATTAAAAAAAGAATTACCTGAAATTTATGTTGGGGACACTGTTAAAGTTGGTGTGAAAATTACAGAAGGTAATAAA GAAAGAGTCCAACCTTATGAAGGCGTTGTCATAGCAAAAAGACATGGAGGAATTAACCAGACTATTACAGTTAGAAGAAT TTTTCAGGGTATAGGTGTTGAAAGAGTATTTATGCTACATAGTCCACAGGTTGCCTCTCTAAAAGTTGAACGTAGAGGTA AAGTAAGAAGAGCTAAGTTATTCTATCTGAGAGATAGAGTAGGAAAAGCTACTCGCGTAAAACAACGCTTTGATCGATAA Protein sequence : MTKMAKEKQEKDLETGIKAGASVDVAVEQKEKNTVSETTQTLSASNLIKEFENEQLKKELPEIYVGDTVKVGVKITEGNK ERVQPYEGVVIAKRHGGINQTITVRRIFQGIGVERVFMLHSPQVASLKVERRGKVRRAKLFYLRDRVGKATRVKQRFDR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| rplS | AAS66827.1 | 50S ribosomal subunit protein | Not tested | SSR-1 | Protein | 3e-26 | 54 |
