|
Name : thiC (P9301_18041) Accession : YP_001092028.1 Strain : Prochlorococcus marinus MIT 9301 Genome accession: NC_009091 Putative virulence/resistance : Unknown Product : thiamine biosynthesis protein ThiC Function : - COG functional category : H : Coenzyme transport and metabolism COG ID : COG0422 EC number : - Position : 1526173 - 1527543 bp Length : 1371 bp Strand : - Note : required for the synthesis of the hydromethylpyrimidine moiety of thiamine DNA sequence : ATGAGAAGTTCTTGGATTAAGCCTCGCCTTGGGAAAGACAATGTAACTCAGATGAACTTTGCGAGAAACGGATATATCAC CGAAGAAATGGATTTTGTTGCTAAAAAAGAGAATCTACCTCCTTCTTTAATAATGGAGGAAGTGGCAAGAGGAAGATTAA TTATTCCAGCTAATATTAATCATTTGAATCTTGAGCCAATGTCTATAGGGGTTGCTTCTCGATGCAAAGTTAATGCCAAT ATTGGTGCTTCTCCCAATGCAAGTGATATAAATGAAGAAGTAGAAAAGCTTAAACTAGCTGTAAAATATGGTGCTGATAC GGTTATGGATCTTTCTACGGGAGGAGTAAATTTAGATGAAGTGCGGCAAGCAATTATTCAAGAATCTCCAGTTCCCATAG GAACTGTTCCTGTTTATCAAGCATTAGAAAGTGTACATGGTTCAATCGATAGACTAACAGAAGACGATTTTCTTCATATT ATTGAAAAACATTGCCAGCAAGGAGTAGATTATCAAACTATTCATGCTGGTCTATTAATAGAGCATTTACCAAAAGTTAA AGGAAGAATCACTGGAATTGTCAGTAGAGGGGGAGGTATTTTAGCTCAATGGATGCTACATCATTTTAAGCAAAATCCCC TCTATACAAGGTTTGATGATATCTGTGAGATTTTTAAGAAATATGATTGTACTTTTTCTCTAGGAGATTCACTAAGGCCT GGATGTTTGCATGATGCTTCTGATGATGCTCAACTAGCTGAATTGAAGACCTTAGGTGAGCTTACTCGAAGAGCATGGGA ACATAATGTTCAAGTAATGGTTGAGGGCCCTGGTCATGTACCTATGGACCAAATTGAGTTTAATGTGAGAAAGCAAATGG AAGAATGTTCAGAAGCTCCTTTCTATGTACTTGGTCCATTAGTTACAGATATTTCTCCTGGTTATGACCATATTTCAAGT GCTATTGGGGCGGCTATGGCAGGATGGTATGGAACGTCTATGTTATGTTACGTAACCCCAAAAGAACATCTAGGCCTCCC AAATGCAGAAGATGTACGAGAAGGATTAATTGCTTATAAAATAGCCGCTCACGCTGCTGATATAGCAAGACATAGAGCTG GTGCTCGTGATAGAGATGATGAACTTAGTCATGCAAGGTATAACTTTGATTGGAATAAACAATTCGAACTTTCTTTAGAT CCAGAGAGGGCAAAGCAGTACCATGATGAAACACTACCTGAAGAAATCTTTAAAAAGGCTGAGTTTTGTTCAATGTGTGG TCCAAAACATTGTCCAATGAATTCAAAGATTTCAGATGAATCTCTTGATCAGTTAAAAGATAAACTTGAAGAATGTAGTA CTTCAGCTTAG Protein sequence : MRSSWIKPRLGKDNVTQMNFARNGYITEEMDFVAKKENLPPSLIMEEVARGRLIIPANINHLNLEPMSIGVASRCKVNAN IGASPNASDINEEVEKLKLAVKYGADTVMDLSTGGVNLDEVRQAIIQESPVPIGTVPVYQALESVHGSIDRLTEDDFLHI IEKHCQQGVDYQTIHAGLLIEHLPKVKGRITGIVSRGGGILAQWMLHHFKQNPLYTRFDDICEIFKKYDCTFSLGDSLRP GCLHDASDDAQLAELKTLGELTRRAWEHNVQVMVEGPGHVPMDQIEFNVRKQMEECSEAPFYVLGPLVTDISPGYDHISS AIGAAMAGWYGTSMLCYVTPKEHLGLPNAEDVREGLIAYKIAAHAADIARHRAGARDRDDELSHARYNFDWNKQFELSLD PERAKQYHDETLPEEIFKKAEFCSMCGPKHCPMNSKISDESLDQLKDKLEECSTSA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00317 | YP_008207782.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR25 | Protein | 4e-118 | 59 |
| BJAB0868_00321 | YP_008211647.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR26 | Protein | 4e-118 | 59 |
| thiC | YP_001598318.1 | thiamine biosynthesis protein ThiC | Not tested | MDA | Protein | 6e-114 | 56 |
