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Name : clpC (P9301_11951) Accession : YP_001091419.1 Strain : Prochlorococcus marinus MIT 9301 Genome accession: NC_009091 Putative virulence/resistance : Virulence Product : ClpC Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : 3.4.21.92 Position : 1008419 - 1010944 bp Length : 2526 bp Strand : - Note : COG542 ATPases with chaperone activity, ATP-binding subunit [Posttranslational modification, protein turnover, chaperones] DNA sequence : ATGTTCGAAAGATTTACAGAAAAGGCTATAAAAGTCATTATGCTTGCTCAAGAGGAAGCTCGAAGACTTGGTCATAATTT TGTTGGAACTGAACAAATTCTTTTGGGGTTAATTGGAGAAGGAACTGGGGTAGCAGCAAAAGTACTTAAATCACTTGGAG TCAATTTAAAAGATTCAAGGATAGAGGTGGAAAAGATAATTGGTAGAGGTTCAGGATTTGTAGCTGTAGAAATACCTTTT ACTCCCAGAGCTAAAAGAGTTTTGGAACTATCTTTGGAAGAGGCTCGTCAACTTGGCCACAATTACATTGGTACAGAACA TTTATTGTTAGGTTTAATAAGAGAAGGTGAAGGTGTGGCTGCAAGAGTTCTTGAAAATCTTAATATTGACCTCACAAAAG TTAGAACTCAAGTTATAAGGATGCTTGGTGAAACCGCCGAAGTTGGCACCGGGGGTAGCTCAAACAAGGGCAACTTAAAA ACTGCTACCCTTGATGAATTCGGAACAAATTTAACAAAATTAGCAAGTGAATCAAAATTAGATCCAGTCGTTGGTCGCCA TTCAGAAATAGATCGTGTCGTTCAAATACTAGGTAGGAGGACAAAAAATAATCCTGTTCTTATTGGGGAGCCAGGTGTAG GTAAAACAGCTATCGCAGAAGGTTTAGCTCAAAGAATACAAACTGGCGATATTCCAGACATACTTGAAGATAAAAGAGTT TTGACCCTTGATATAGGTCTTTTGGTAGCAGGAACAAAATATAGAGGTGAATTTGAAGAAAGGTTAAAAAAAATTATGGA AGAAATTAAATCAGCGGGTAACGTCATTCTTGTCATAGATGAAGTGCATACTTTAATTGGTGCTGGAGCTGCTGAAGGAG CTATAGATGCAGCAAATATACTTAAGCCAGCATTAGCTAGAGGGGAACTTCAATGTATTGGAGCAACAACTCTAGACGAA TATAGAAAACATATTGAAAGAGATGCTGCTTTAGAAAGAAGATTCCAGCCTGTAATGGTTGGGGAACCATCCATAGAAGA TACAATCGAAATTTTAAAAGGTCTCAGAGAGCGTTACGAACAACATCATCGACTAAAAATTACTGATGATGCCCTAGAGG CCGCCGCTCATTTAGGTGATCGTTACATATCTGATAGGTTTTTACCTGATAAGGCTATTGACCTTATCGATGAGGCTGGA AGTAGGGTGCGTTTAATAAACTCTAAACTTCCGCCTGAAGCAAAACAAATAGATAGAGAATTAAGACAAATCCAAAAACA GAAGGAAGAATCTGTAAGAGACCAAAATTTTGATCAGGCTGGGCAATTACGCGAAAAAGAGATGGAATTGTCTGCAAAAA TTAAAGAGGTTTTGGATAATAAGAAAGAATCTACAGCTGTAGATCAAACTGATCCTGATAATTCTGCAAAAAGTGATTCT AAACTTTTACAAAGTCCTCTTGTCAGTGAAGAGGATGTAGCTCATATTGTGGCTTCATGGACAGGTGTTCCTGTTCAAAA ATTAACAGAAACAGAATCAGTCAAGCTTCTCAATATGGAGGAAACACTTCACCAAAGACTGATTGGACAAGATGAAGCTG TAAAGGCTGTGTCAAGAGCTATAAGAAGAGCAAGAGTTGGATTAAAAAATCCTAATAGACCCATAGCAAGTTTTATCTTT TCTGGACCTACTGGTGTTGGTAAAACTGAATTGACTAAATCATTGGCTTCATATTTCTTCGGTAGTGAAGAAGCAATGAT CAGATTAGATATGTCAGAATTCATGGAAAGACATACAGTTAGTAAACTTATAGGCTCTCCTCCTGGCTATGTTGGTTTTA ATGAAGGTGGTCAGCTTACTGAAGCTGTTAGAAGACGCCCTTACACCGTTGTTTTATTTGATGAAGTTGAAAAGGCGCAT CCAGATGTTTTTAACTTATTATTGCAACTACTTGAAGACGGAAGATTAACTGACTCCAAAGGGAGAACTGTAGATTTTAA AAATACATTATTAATAATGACCTCTAATATCGGTTCAAAAGTTATCGAAAAAGGTGGTGGTGGACTAGGTTTTGAATTCT CAGGTGATTCAGTTGAAGATAGCCAATATAATAGAATTAAATCACTAGTTAATGAAGAACTTAAGCAATACTTTAGGCCT GAATTTTTAAATAGACTTGATGAAATAATTGTATTTAGACAATTAACTAAAAATGAAGTTAAAGAAATTGCTGAAATAAT GTTGCAAGAAGTTTTTATCCGACTACAAGATAAAGGTATTAAATTAAATGTCACCGATGCTTTTAAAGAAAGACTTGTTG AAGAAGGTTACAATCCTTCATACGGAGCGAGACCTTTAAGAAGGGCAGTTATGCGTTTACTAGAAGATAGTTTGGCTGAA GAAGTTCTTTCTGGAAGAATTAAAGACGGAGATAATGCTTTAGTTGATATAGATGATAATAAAAAAGTTACTATAAATAT TTCTTCTGAAGAATCTTCTCAAGAGCTAGCAGGTGCTAACTTCTAA Protein sequence : MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSLGVNLKDSRIEVEKIIGRGSGFVAVEIPF TPRAKRVLELSLEEARQLGHNYIGTEHLLLGLIREGEGVAARVLENLNIDLTKVRTQVIRMLGETAEVGTGGSSNKGNLK TATLDEFGTNLTKLASESKLDPVVGRHSEIDRVVQILGRRTKNNPVLIGEPGVGKTAIAEGLAQRIQTGDIPDILEDKRV LTLDIGLLVAGTKYRGEFEERLKKIMEEIKSAGNVILVIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDE YRKHIERDAALERRFQPVMVGEPSIEDTIEILKGLRERYEQHHRLKITDDALEAAAHLGDRYISDRFLPDKAIDLIDEAG SRVRLINSKLPPEAKQIDRELRQIQKQKEESVRDQNFDQAGQLREKEMELSAKIKEVLDNKKESTAVDQTDPDNSAKSDS KLLQSPLVSEEDVAHIVASWTGVPVQKLTETESVKLLNMEETLHQRLIGQDEAVKAVSRAIRRARVGLKNPNRPIASFIF SGPTGVGKTELTKSLASYFFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGFNEGGQLTEAVRRRPYTVVLFDEVEKAH PDVFNLLLQLLEDGRLTDSKGRTVDFKNTLLIMTSNIGSKVIEKGGGGLGFEFSGDSVEDSQYNRIKSLVNEELKQYFRP EFLNRLDEIIVFRQLTKNEVKEIAEIMLQEVFIRLQDKGIKLNVTDAFKERLVEEGYNPSYGARPLRRAVMRLLEDSLAE EVLSGRIKDGDNALVDIDDNKKVTINISSEESSQELAGANF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 0.0 | 56 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpC | YP_001091419.1 | ClpC | VFG0079 | Protein | 0.0 | 58 |
| clpC | YP_001091419.1 | ClpC | VFG0080 | Protein | 1e-150 | 49 |
