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Name : tcdC (CD630_06640) Accession : YP_001087138.1 Strain : Clostridium difficile 630 Genome accession: NC_009089 Putative virulence/resistance : Virulence Product : Negative regulator of toxin gene expression Function : - COG functional category : - COG ID : - EC number : - Position : 804310 - 805008 bp Length : 699 bp Strand : - Note : Evidence 1a : Function experimentally demonstrated in the studied strain; PubMedId : 18480323,17542920,17035492, 15673503; Product type r : regulator DNA sequence : ATGTTTTCTAAAAAAAATGATGGTAACGAATTTAGTAATGAAGGAAAAGGAAGCTCTAAGAAAATAATTAAATTCTTTAA GAGCACAAAGGGTATTGCTCTACTGGCATTTATTTTAGGCGTGTTTTTTGGCAATATATCCTCACCAGCTTGTTCTGAAG ACCATGAGGAGGTCATTTCTAACCAAACATCAGTTATAGATTCTCAAAAAACAGAAATAGAAACTTTAAATAGCAAATTG TCTGATGCTGAACCATGGTTCAAAATGAAAGACGACGAAAAGAAAGCTATTGAAGCTGAAAATCAACGTAAAGCTGAAGA AGCTAAAAAAGCTGAAGAAGCTAAAAAGGCTGAAGAACAACGCAAAAAAGAAGAAGAGGAGAAGAAAGGATATGATACTG GTATTACTTATGACCAATTAGCTAGAACACCTGATGATTATAAGTACAAAAAGGTAAAATTTGAAGGTAAGGTTATTCAA GTTATTGAAGATGGTGATGAGGTGCAAATAAGATTAGCTGTGTCTGGAAATTATGATAAGGTTGTACTATGTAGTTATAA AAAATCAATAACTCCTTCAAGAGTATTAGAGGATGATTACATAACTATAAGAGGTATAAGTGCTGGAACTATAACTTATG AATCAACTATGGGTGGAAATATAACTATACCAGGGATAGCTGTAGAGAAAATTAATTAA Protein sequence : MFSKKNDGNEFSNEGKGSSKKIIKFFKSTKGIALLAFILGVFFGNISSPACSEDHEEVISNQTSVIDSQKTEIETLNSKL SDAEPWFKMKDDEKKAIEAENQRKAEEAKKAEEAKKAEEQRKKEEEEKKGYDTGITYDQLARTPDDYKYKKVKFEGKVIQ VIEDGDEVQIRLAVSGNYDKVVLCSYKKSITPSRVLEDDYITIRGISAGTITYESTMGGNITIPGIAVEKIN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tcdC | CAA63565.1 | - | Virulence | PaLoc | Protein | 6e-70 | 98 |
