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Name : tcdE (CD630_06610) Accession : YP_001087136.1 Strain : Clostridium difficile 630 Genome accession: NC_009089 Putative virulence/resistance : Virulence Product : Holin-like pore-forming protein Function : - COG functional category : R : General function prediction only COG ID : COG4824 EC number : - Position : 794615 - 795115 bp Length : 501 bp Strand : + Note : Evidence 1a : Function experimentally demonstrated in the studied strain; PubMedId : 18480323,18480324,18289919, 15673503, 11444771; Product type t : transporter DNA sequence : ATGCACAGTAGTTCACCTTTTTATATTTCTAATGGTAACAAAATATTTTTTTATATAAACCTAGGAGGCGTTATGAATAT GACAATATCTTTTTTATCAGAGCATATATTTATAAAGTTAGTAATTTTAACTATATCATTTGATACATTATTAGGATGTT TAAGTGCAATAAAAAGTCGTAAATTTAATTCTAGTTTTGGAATAGATGGAGGAATCAGAAAAGTAGCAATGATAGCATGT ATATTTTTTTTATCAGTAGTTGACATTCTTACAAAGTTTAACTTTTTATTTATGTTACCACAAGATTGTATCAATTTTTT AAGACTAAAACATCTTGGAATATCTGAATTTTTCTCTATTTTATTTATTTTATATGAAAGTGTAAGTATATTAAAAAATA TGTGCTTATGTGGATTACCAGTACCTAAGAGATTAAAGGAAAAAATAGCAATTTTACTAGATGCAATGACAGATGAAATG AATGCTAAGGATGAAAAGTAA Protein sequence : MHSSSPFYISNGNKIFFYINLGGVMNMTISFLSEHIFIKLVILTISFDTLLGCLSAIKSRKFNSSFGIDGGIRKVAMIAC IFFLSVVDILTKFNFLFMLPQDCINFLRLKHLGISEFFSILFILYESVSILKNMCLCGLPVPKRLKEKIAILLDAMTDEM NAKDEK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tcdE | CAA63563.1 | - | Virulence | PaLoc | Protein | 4e-73 | 100 |
