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Name : clpC (CD630_00260) Accession : YP_001086489.1 Strain : Clostridium difficile 630 Genome accession: NC_009089 Putative virulence/resistance : Virulence Product : class III stress response-related ATPase Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 42914 - 45361 bp Length : 2448 bp Strand : + Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 12354604, 15529410, 16525504; Product type e : enzyme DNA sequence : GTGAACTTCAATAGATTTACACAAAGAGCTAAAAAGGCAATTGATTTAGCGTTTGAATCTGCTAAAAGTCTAGGACACAA TATTGTCGGAAGTGAACATATACTTTTAGGTCTTTTAAGAGAAGAAGAAGGTATAGCTGCTAAAGTTCTAAGTAAAGTTG GATTTACAGAAGCTTATTTAGAAGGCAAAATAGTTGATATGGAAGGTAAGGGAGAAGAAATCTCAGAAGATATAGTATTA AGTCCAAGAAGTAAACAAATACTTGAATTATCAGGAATGTTTGCAAATAAATTAAAAACAAATTATATTGGGACTGAGCA TATATTATTAGCAATTATTCAAGAAGGTGAAGGAATAGCTAATAAGATTTTAAATTATGCTGGAGTAAATGATAGGACTT TAGCCCAATTAACAATTGATATGATGGGTATTAGTGATAAAAATCAATACAAAGCAGAAAATAGTTACACGGGCAACCAG AATCAAGCAGAATCTAAAGTACTTGATAAGTATGGAAGAAATCTTACACTATATGCAAAACAGAATAAAATAGACCCTGT AATAGGTAGAGAAAAAGAAATACAAAGAGTAATACAAATATTAAGTAGAAGAACTAAAAACAATCCAGTGTTGATAGGAG ACCCAGGTGTAGGGAAAACAGCCATAGCTGAAGGTCTGGCTACAAATATAGCCTTAGGAAATGTTCCAGAAACACTAAAA AACAAAACTTTATACTCTTTAGAGATGGGTTCATTATTGGCTGGAGCTAAGTATAGAGGAGAATTTGAAGAAAGAATTAA AGAAGTTGTAGATGAAGTTGTTAAAAATGGAAACATAATCTTATTTATAGATGAGATGCACACAATAATAGGGGCTGGGT CTACTGGAGAAGGCTCTATAGATGCTTCAAATATATTAAAGCCAGCCTTAGCAAGAGGAGAAATACAAGTTATAGGTGCA ACTACAATTGATGAATATAGAAAGCATGTTGAAAAAGATTCTGCTCTAGAAAGAAGATTCCAACCAGTTATGGTAGATGA ACCAACTAAAGAGGACTCAATAAAAATATTAGAAGGATTAAGAGATAAATATGAAGCTCATCATAAAGTTAAAATAACTG ATGATGCTATAAAGGCAGCTGTAGAATTATCAACTAGATATATATCAGACAGATATCTGCCAGATAAAGCTATAGACTTG ATTGATGAAGCTGCATCAAAAGTAAGATTAAAAGAAAATACACCTCCTTCAGAAATAAAAAAATTAGAACTAGAAATAGA AAATATAGATAAAGAAAAAGAAGAAGCAGTAAGATGTCAAGACTTTGAGAAAGCAGCCAAAATAAGAGATGAACAAGGTC TACTTAAAAAACAATTAGAAGATGTTAGAGAAAGATGGAACAAGTCATCTAAACATTCAGATTTAGTTGATGGAGAAGTT ATTGCTGAAGTAGTGGGCTTATGGACAGGAATACCAGTTAATAAAATTCTTGAAGAAGAGGCTGATAGACTTTTGAGACT TGAGGAAATACTGCACAATAGAGTTATAGGTCAAGAACAAGCAGTAAAATCTATTTCAAAGGCAATCAGAAGGTCAAGAG CAGGTCTTAAAGACCCTAATAGACCAATTGGTTCATTTTTATTTTTAGGTCCAACAGGAGTAGGTAAAACAGAATTATCT AAGGCATTAGCAGAAGTGCAATTTGGAGATGAAAATCAAATAATTAGAATAGATATGTCTGAATATATGGAAAAACATGC TGTGTCAAGAATGATAGGTTCACCTCCAGGTTATGTAGGTCATGATGAAGGTGGTCAATTAACTGAAAAAGTAAGAAGAA ATCCATATTCAGTTATCTTATTTGATGAGATAGAAAAAGCTCATCCAGATGTATTTAATATTCTGTTACAAATTCTAGAT GATGGTAGACTAACTGATTCAAAAGGAAGAACTGTAGATTTTAAGAATACTATTGTAATAATGACATCAAATGTTGGAGC ATCTACAATTGGTAGACAAAAAACTTTAGGATTTAGTATAGCTAAAGGAGACGAAGAAGAAAAATCTCAATATGAAAAAA TGAAAGAAAATATAATGGGTGAATTAAAACAAAGATTCAGACCAGAGTTTTTAAACAGAATAGATGATATAATTGTTTTC CACTCACTAAATGAAAATCATATATCAAAAATAGTACTTTTAATGGCAGCGAAACTACAAGAGAGATTAAAAGAAATGGA TATAAAATTAGAAATGAGTGATGAGGCTGTTAAATTAATTTCTAAATCTGGATTTGACTTAGAATATGGAGCAAGACCTC TTAAAAGAGCTTTACAAAAAGAGTTGGAAGATGAGCTATCTGAAGCAATCTTAAAAGGTAATGTGAAAAAGGGAAGTAAT GTAGTAGCAAAAGTCAAAGATGAAAAAATAGTTTTTGAAACTAAATAA Protein sequence : MNFNRFTQRAKKAIDLAFESAKSLGHNIVGSEHILLGLLREEEGIAAKVLSKVGFTEAYLEGKIVDMEGKGEEISEDIVL SPRSKQILELSGMFANKLKTNYIGTEHILLAIIQEGEGIANKILNYAGVNDRTLAQLTIDMMGISDKNQYKAENSYTGNQ NQAESKVLDKYGRNLTLYAKQNKIDPVIGREKEIQRVIQILSRRTKNNPVLIGDPGVGKTAIAEGLATNIALGNVPETLK NKTLYSLEMGSLLAGAKYRGEFEERIKEVVDEVVKNGNIILFIDEMHTIIGAGSTGEGSIDASNILKPALARGEIQVIGA TTIDEYRKHVEKDSALERRFQPVMVDEPTKEDSIKILEGLRDKYEAHHKVKITDDAIKAAVELSTRYISDRYLPDKAIDL IDEAASKVRLKENTPPSEIKKLELEIENIDKEKEEAVRCQDFEKAAKIRDEQGLLKKQLEDVRERWNKSSKHSDLVDGEV IAEVVGLWTGIPVNKILEEEADRLLRLEEILHNRVIGQEQAVKSISKAIRRSRAGLKDPNRPIGSFLFLGPTGVGKTELS KALAEVQFGDENQIIRIDMSEYMEKHAVSRMIGSPPGYVGHDEGGQLTEKVRRNPYSVILFDEIEKAHPDVFNILLQILD DGRLTDSKGRTVDFKNTIVIMTSNVGASTIGRQKTLGFSIAKGDEEEKSQYEKMKENIMGELKQRFRPEFLNRIDDIIVF HSLNENHISKIVLLMAAKLQERLKEMDIKLEMSDEAVKLISKSGFDLEYGARPLKRALQKELEDELSEAILKGNVKKGSN VVAKVKDEKIVFETK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 0.0 | 53 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpC | YP_001086489.1 | class III stress response-related ATPase | VFG0079 | Protein | 0.0 | 58 |
| clpC | YP_001086489.1 | class III stress response-related ATPase | VFG0080 | Protein | 7e-151 | 49 |
