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Name : CD630_05100 (CD630_05100) Accession : YP_001086987.1 Strain : Clostridium difficile 630 Genome accession: NC_009089 Putative virulence/resistance : Unknown Product : RNA polymerase sigma factor Function : - COG functional category : K : Transcription COG ID : COG1595 EC number : - Position : 603157 - 603582 bp Length : 426 bp Strand : + Note : Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; PubMedId : 12568329, 12568327,17650959, 11157942,11073898, 8863741; Product type pr : putative regulator DNA sequence : ATGAAACCATCTTCTTTTCAAGAGAGAATTGAACATCAGTTTGATTTTATCTGTATGCGAGCTATGGACGACGAGCGGAA GAATTATTTCCTTTATCTTTCAAGGCTGGCAAAGCGTGAAGTGTCCTTTTCGGATATTGGCGATTATCTCGTCAATCAGT TTGCAACGACAGACAGCTATTCATCTGATTTTCAAATTTTTACGCTCAATGATATTTCTGTTGGTATCGAAAATGATTTA TTGAGTGAAGCACTAAAAGAATTGCCAGACAAGAAGCGTGAAATCCTACTGCTGTTCTATTTTATGGACATGAGTGATTC AGAAATAGCGGATTTACTGAAATTGAACCGCTCTACTGTCTATCGACATAGAACCAGTGGACTAGACTTAATCAAGAAGT TTATGGAGGAGGAAAATGAAGAATGA Protein sequence : MKPSSFQERIEHQFDFICMRAMDDERKNYFLYLSRLAKREVSFSDIGDYLVNQFATTDSYSSDFQIFTLNDISVGIENDL LSEALKELPDKKREILLLFYFMDMSDSEIADLLKLNRSTVYRHRTSGLDLIKKFMEEENEE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SSU05_0919 | YP_001198285.1 | hypothetical protein | Not tested | 89K | Protein | 6e-54 | 88 |
| SSU98_0925 | YP_001200483.1 | hypothetical protein | Not tested | 89K | Protein | 6e-54 | 88 |
