Gene Information

Name : CD630_05070 (CD630_05070)
Accession : YP_001086981.1
Strain : Clostridium difficile 630
Genome accession: NC_009089
Putative virulence/resistance : Unknown
Product : conjugative transposon protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 598817 - 599749 bp
Length : 933 bp
Strand : +
Note : Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; PubMedId : 12568329, 12568327,17650959, 11157942,11073898, 8863741; Product type h : extrachromosomal origin

DNA sequence :
ATGAGAAAGGAAGATTCAATGATGAAATTCAGAAAAAATCAGAATAAAGAAAAACAGATACCAAAGGAAAAGAAACCTCG
TATCTACAAAGTCAATCCTCGTAAAAAGGTTGTGATTGGCTTATGGGTGCTTTTAGGGCTTAGTTTCAGCTTTGCAATAT
TTAAGCACTTTACAGCCGTTGATACCCACACCATTCACGAAACAACCATCATAGAAAAGGAATATGTTGATACTCATAAT
GTAGAAAATTTTGTAGAGAACTTTGCGAAAGTTTACTATTCATGGGAACTAAACGACCAGTCCATTGATAATCGTATGGA
AAACTTAAAAGCCTATCTGACAGAGGAACTTCAAGCTCTCAATATTGATACAGTCCGAAAGGATATTCCTGTATCGTCTT
CTGTAAGAGGGGTTCAGATATGGATGGTAAAAGCAGATGGCGAAAACCAGTTTGATGTGACCTATAGTGTAGACCAGTTG
ATTACAGAGGGGGAAAATATAAAGACCGTCCATTCTGCTTATGAAGTGACAGTCTATGTAGATGGTTCTGGAAATATGGT
ACTGACTAAAAACCCGACCATTACCAGCATACCTAAGAAATCAGACTATAAACCAAAAGTCATTGAAAGTGATGGTACAG
TTGATTCCATTATGACAAATGAAATCATTGAGTTTCTAACGACATTCTTCAAGCTCTATCCTACAGCAACAGCGAGTGAA
CTTTCTTACTATGTGAATGATGGTATTTTGAAATCTATCGGAAAAGATTATATTTTTCAAGAACTCGTGAATCCTATCTA
CAATCGTAAAGATAATCAAGTCACGGTATCACTGACAGTAAAGTATCTCGACCAGCAGACCAAAGCAACGCAAGTATCTC
AATTTGATTTGGTGCTAGAAAAAGTAGGAAATAACTGGAAGATTATAAAATAA

Protein sequence :
MRKEDSMMKFRKNQNKEKQIPKEKKPRIYKVNPRKKVVIGLWVLLGLSFSFAIFKHFTAVDTHTIHETTIIEKEYVDTHN
VENFVENFAKVYYSWELNDQSIDNRMENLKAYLTEELQALNIDTVRKDIPVSSSVRGVQIWMVKADGENQFDVTYSVDQL
ITEGENIKTVHSAYEVTVYVDGSGNMVLTKNPTITSIPKKSDYKPKVIESDGTVDSIMTNEIIEFLTTFFKLYPTATASE
LSYYVNDGILKSIGKDYIFQELVNPIYNRKDNQVTVSLTVKYLDQQTKATQVSQFDLVLEKVGNNWKIIK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSU05_0923 YP_001198289.1 Tn916 hypothetical protein Not tested 89K Protein 2e-122 88
SSU98_0929 YP_001200487.1 Tn916 hypothetical protein Not tested 89K Protein 2e-122 88
smi_1696 YP_003446798.1 hypothetical protein Not tested The aminoglycoside resistance gene cluster Protein 1e-73 51