Gene Information

Name : CD630_05030 (CD630_05030)
Accession : YP_001086978.1
Strain : Clostridium difficile 630
Genome accession: NC_009089
Putative virulence/resistance : Unknown
Product : membrane protein
Function : -
COG functional category : S : Function unknown
COG ID : COG4372
EC number : -
Position : 593007 - 595175 bp
Length : 2169 bp
Strand : +
Note : Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; PubMedId : 12568329, 12568327,17650959, 11157942,11073898, 8863741; Product type h : extrachromosomal origin

DNA sequence :
ATGATGGTACAGAAATTAAAATCAAACTGGACTCTGAAGCGTCTAAATAAAGTGGCAATGACAGTGGTTTTATCACTCGT
GATTGCCATTTTTCTTTTAGCAATGTTGGGAACAGTGGTTCAAGCTGCGGGCTTGGTAGATGATACGGTCAATGTAGCAA
ATGAATACAGCCGATACCCACTTGAAAACTATCAACTGGATTTTTATGTTGATAATAGCTGGGGCTGGCTACCGTGGAAC
TGGTCGGACGGGATTGGAAAACAGGTCATGTATGGACTATATGCTATTACCAATTTTATTTGGACAATCAGTCTTTATGT
TTCCAATGCGACTGGCTACTTAGTTCAAGAAGCCTATTCCCTCGACTTCATTTCTGCTACAGCAGATTCCATTGGCAAGA
ATATGCAGACCCTTGCAGGAGTTACGCCTAGCGGACTATCAACAGAGGGATTCTATGTTGGATTCCTCTTACTCTTGATT
TTGGTTCTTGGGGTTTATGTTGTCTATACAGGACTGATAAAAAGAGAAACTACAAAAGCGATTCATGCCATTGTGAACTT
TGTCATGGTATTTATCCTATCAGCTTCCTTTATTGCCTATGCTCCCGACTACATTAAAAAAATCAATGATTTTTCATCAG
ACATCAGTCAAGCCAGCTTATCATTAGGAACGAAAATCGTCATGCCCCATTCAGACAGTCAAGGAAATGACAGTGTGGAC
TTGATACGTGACAGCCTATTTTCCATACAGGTTCAACAACCGTGGCTACTGCTTCAATACAACAGTTCAGACATTGAAAG
TATTGGTGCTGACCGTGTGGAAAGTCTACTTTCAACCAGTCCAGACAGTAATAATGGAGAAGACAGAGAAAAAATTGTAG
CAGAAGAAATCGAAGACAGAAACAATGTGAACATGACGATTACAAAAACTATTAACCGTTTGGGTACAGTCTTCTTTCTC
TTTGTATTCAATATCGGGATTTCTATATTCGTATTCCTACTAACAGGAATCATGATTTTCTCGCAGGTACTTTTTATCAT
CTATGCCATGTTTCTACCTGTTAGCTTTATTTTAAGCATGATTCCGTCCTTTGATGGTATGTCAAAACGAGCCATTATCA
AACTCTTTAATACCATTTTGACACGAGCTGGAATCACGCTGATTATTACGACAGCCTTTAGTATTTCAACCATGCTCTAT
ACCTTATCGGCTGGTTATCCGTTCTTTTTGATTGCCTTTTTACAGATTGTGACCTTTGCAGGAATCTACTTCAAACTGAG
CGATTTAATGAGTATGTTTTCGCTTCAAAGCAACGATTCTCAAAGTGTGGGAAGTCGTGTGATGAGAAAACCTCGTATGC
TTATGCACGCTCATATGCACCGCCTACAGCGTAAACTTGGACGCTCCATGACAGCTTTAGGTGCTGGCTCTGCCATTGCC
AGTGCTACAGGAAAACAAGGACAGTCGGGTAGTTCTGGTAGGACACAAGCAGATCACACCCGTCCAGACGGACAGGAAAA
ATCAACACTTGGAAAACGTATCGGACAAACAATCGGAGCAGTTGCTGATACCAAAGATAAAATCGTTGATTCTGCTGGTA
ATCTCAAAGAACAGGTTAAGGATATTCCGACCAATGCAAGATATGCAGTGTATCAAGGAAAATCCAAAGCAAAAGAAAAT
GTTCGTGACCTAACTTCCAGTATTTCTCAAACCAGAGCAGACAGAGCCAGCGGACGCAAGGAACAGCAGGAACAAAGACG
CAAAACCATTGCAGAGCGTCGCTCTGAAATGGAACAGGTCAAACAGAAAAAACAGCCAGCTTCTTCCGTTCATGAAAGAC
CAGCTACTAAGCAAGAACAATCTCATGATGGACAGACCGCAAAACAATCTTCTATTCAGACTTCACGCATGGAATCTCAA
CAAGCCAAACAGGAGCGTCCAGCAGTTAAGTCCGATTCTTTAAGTTTAAAAGCGGAACGACAAAACCGTACTACACAAGA
AAGAACAGTTCAAAAGCCAGCAACTTCAACTACACCAGCAGACAGAGCTTCACAACGTCCAGTCACAAAAGAGCGTCCGT
CTACTGTTCAAAGAGTTCAAAGCCAAAACCTTAGAAATAGACCACCAATAAAATCCGCCACTATCAAGAAAGGCAGTAAG
AAACCATGA

Protein sequence :
MMVQKLKSNWTLKRLNKVAMTVVLSLVIAIFLLAMLGTVVQAAGLVDDTVNVANEYSRYPLENYQLDFYVDNSWGWLPWN
WSDGIGKQVMYGLYAITNFIWTISLYVSNATGYLVQEAYSLDFISATADSIGKNMQTLAGVTPSGLSTEGFYVGFLLLLI
LVLGVYVVYTGLIKRETTKAIHAIVNFVMVFILSASFIAYAPDYIKKINDFSSDISQASLSLGTKIVMPHSDSQGNDSVD
LIRDSLFSIQVQQPWLLLQYNSSDIESIGADRVESLLSTSPDSNNGEDREKIVAEEIEDRNNVNMTITKTINRLGTVFFL
FVFNIGISIFVFLLTGIMIFSQVLFIIYAMFLPVSFILSMIPSFDGMSKRAIIKLFNTILTRAGITLIITTAFSISTMLY
TLSAGYPFFLIAFLQIVTFAGIYFKLSDLMSMFSLQSNDSQSVGSRVMRKPRMLMHAHMHRLQRKLGRSMTALGAGSAIA
SATGKQGQSGSSGRTQADHTRPDGQEKSTLGKRIGQTIGAVADTKDKIVDSAGNLKEQVKDIPTNARYAVYQGKSKAKEN
VRDLTSSISQTRADRASGRKEQQEQRRKTIAERRSEMEQVKQKKQPASSVHERPATKQEQSHDGQTAKQSSIQTSRMESQ
QAKQERPAVKSDSLSLKAERQNRTTQERTVQKPATSTTPADRASQRPVTKERPSTVQRVQSQNLRNRPPIKSATIKKGSK
KP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSU05_0925 YP_001198291.1 hypothetical protein Not tested 89K Protein 0.0 91
SSU98_0931 YP_001200489.1 hypothetical protein Not tested 89K Protein 0.0 91