Gene Information

Name : CD630_05020 (CD630_05020)
Accession : YP_001086977.1
Strain : Clostridium difficile 630
Genome accession: NC_009089
Putative virulence/resistance : Unknown
Product : ATPase
Function : -
COG functional category : U : Intracellular trafficking, secretion and vesicular transport
COG ID : COG3451
EC number : -
Position : 590560 - 593007 bp
Length : 2448 bp
Strand : +
Note : Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; PubMedId : 12568329, 12568327,17650959, 11157942,11073898, 8863741; Product type h : extrachromosomal origin

DNA sequence :
ATGGCATATCCAATTAAATACATTGAAAATAATCTGGTCTGGAATAAAGATGGCGAATGTTACGCCTATTATGAGCTTGT
TCCTTACAATTACTCATTTCTAAGTCCAGAACAGAAAATACAAGTGCATGATTCTTTCAGACAGCTTATCGCACAAAATC
GTGATGGCAAGATTCATGCCTTACAAATCAGTACAGAATCCAGCATACGTTCAGCACAAGAGCGTTCTAAAAATGAAGTC
ACTGGCAAGCTCAAAGCGATTGCCTATGACAAAATCGACCAACAGACAGACGCTTTAATATCCATGATTGGCGAAAATCA
AGTGGATTACCGTTTCTTTATCGGCTTTAAGTTGCTTCTCAACGATCAGGAGTTTTCCATGAAAAGTCTTACCGTTGAAG
CCAAAAATGCTTTGTCTGATTTTGTCTATGATGTGAACCATAAGTTAATGGGAGATTTTGTCAGCATGAGTAATGATGAA
ATCCTGCGTTTTCAGAAGATGGAAAAGCTCTTGGAAAATAAAATCTCTCGTCGTTTCAAAATCCGCAGACTGAATAAGGA
CGACTTCGGCTATCTGATTGAACATCTTTACGGACAGACAGGTACAGCTTATGAAGATTATGAGTATCATCTATCAAAGA
AGAAGCTGGATAATGAAACCTTGATTAAATACTATGACCTCATCAAGCCTACTCGCTGTTTAATAGAAGAAAAACAGCGA
TACTTGAAAATCCAGCAGGAAGATGAAACCGTCTATGTGGCTTATTTTACCATTAACAGTATTGTCGGAGAGCTGGACTT
TCCATCAAGTGAAATTTTCTATTACCAGCAACAACAATTTACCTTTCCCATTGACACGTCCATGAATGTGGAAATCGTGG
CAAATTGTAAAGCATTAAGCACCGTTCGCAATAAAAAGAAAGAGTTGAAAGATTTAGATAATCACGCATGGCAAAGTGAT
AATGAAACCAGCTCCAATGTGGCAGAAGCCTTGGATAGTGTAAATGAGCTGGAAACCAATTTAGACCAATCCAAAGAATC
TATGTACAAACTCTCTTATGTGGTTCGGGTTTCTGCTAATGATTTGGACGAGTTGAAACGTCGCTGTAATGAAGTGAAAG
ACTTTTACGACGATTTGTCTGTGAAACTGGTTCGACCTTTTGGCGATATGCTGGGCTTACATGAAGAATTTCTGCCAGCA
AGCAAAAGATATATGAATGACTATATTCAATATGTAACTTCTGATTTCCTCGCTGGACTTGGCTTTGGTGCTACGCAAAT
GCTGGGCGAAAATGAAGGGATTTATGTTGGCTATAGCTTAGATACAGGACGCAATGTGTATCTCAAACCAGCGCTTGCCA
GTCAAGGGGTTAAGGGTTCAGTAACCAATGCGTTAGCGTCGGCTTTTGTTGGCTCGCTGGGTGGTGGTAAATCCTTTGCG
AATAACCTTATCGTCTATTATGCAGTGCTTTATGGAGCACAAGCAGTGATTGTTGACCCAAAGGCGGAACGTGGCAGATG
GAAAGAAACGCTTCCAGAAATCGCTCACGAGATTAACATTGTGAATCTCACTTCTGATGAGAAAAGCAAAGGACTGCTTG
ACCCTTATGTAATTATGAAAAATCCAAAAGATTCTGAATCACTGGCTATTGATATTCTGACATTCCTTACAGGGATATCC
TCACGAGATTCTGAACGTTTTCCCGTACTACGGAAAGCGATTCGTGCAGTAACCAATAGTGAAGTGCGTGGACTTCTTAA
AGTCATTGAGGAATTGCGGGTCGAGGGAACACCAACAAGCACCAGTATCGCTGACCATATCGAGAGCTTTACGGATTATG
ATTTTGCACATCTCTTATTCAGTGATGGCTATGTCGAACAATCTATCAGTCTTGAAAAACAGCTCAACATTATACAGGTG
GTGGATTTGGTATTACCTGATAAGGAAACAAGTTTTGAGGAATACACGACAATGGAACTATTATCCGTTGCTATGTTAAT
TGTCATTAGCACCTTTGCGTTGGATTTTATCCATTCAGACAGAAGCCTTTTCAAGATTGTAGACCTTGACGAAGCATGGA
GTTTCTTACAGGTGGCACAAGGTAAAACCTTATCTATGAAGTTAGTAAGAGCTGGACGTGCTATGAATGCAGGTGTCTAT
TTTGTTACTCAAAATACAGATGACCTTTTAGATGAAAAATTGAAAAATAATCTTGGTTTGAAGTTTGCCTTTCGTTCCAC
TGATATCAACGAAATTAAAAAGACCTTAGCTTTTTTTGGAGTTGACCCAGAGGACGAAAACAATCAGAAGCGACTTCGTG
ACTTAGAGAACGGACAATGCCTTATCAGTGATTTATATGGTCGTGTCGGTGTGATACAGTTCCACCCAGTCTTTGAAGAA
TTACTTCATGCTTTTGATACCAGACCGCCTGTGAGAAAAGAGGTGTAA

Protein sequence :
MAYPIKYIENNLVWNKDGECYAYYELVPYNYSFLSPEQKIQVHDSFRQLIAQNRDGKIHALQISTESSIRSAQERSKNEV
TGKLKAIAYDKIDQQTDALISMIGENQVDYRFFIGFKLLLNDQEFSMKSLTVEAKNALSDFVYDVNHKLMGDFVSMSNDE
ILRFQKMEKLLENKISRRFKIRRLNKDDFGYLIEHLYGQTGTAYEDYEYHLSKKKLDNETLIKYYDLIKPTRCLIEEKQR
YLKIQQEDETVYVAYFTINSIVGELDFPSSEIFYYQQQQFTFPIDTSMNVEIVANCKALSTVRNKKKELKDLDNHAWQSD
NETSSNVAEALDSVNELETNLDQSKESMYKLSYVVRVSANDLDELKRRCNEVKDFYDDLSVKLVRPFGDMLGLHEEFLPA
SKRYMNDYIQYVTSDFLAGLGFGATQMLGENEGIYVGYSLDTGRNVYLKPALASQGVKGSVTNALASAFVGSLGGGKSFA
NNLIVYYAVLYGAQAVIVDPKAERGRWKETLPEIAHEINIVNLTSDEKSKGLLDPYVIMKNPKDSESLAIDILTFLTGIS
SRDSERFPVLRKAIRAVTNSEVRGLLKVIEELRVEGTPTSTSIADHIESFTDYDFAHLLFSDGYVEQSISLEKQLNIIQV
VDLVLPDKETSFEEYTTMELLSVAMLIVISTFALDFIHSDRSLFKIVDLDEAWSFLQVAQGKTLSMKLVRAGRAMNAGVY
FVTQNTDDLLDEKLKNNLGLKFAFRSTDINEIKKTLAFFGVDPEDENNQKRLRDLENGQCLISDLYGRVGVIQFHPVFEE
LLHAFDTRPPVRKEV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSU05_0926 YP_001198292.1 hypothetical protein Not tested 89K Protein 0.0 98
SSU98_0932 YP_001200490.1 hypothetical protein Not tested 89K Protein 0.0 98