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Name : CD630_04990 (CD630_04990) Accession : YP_001086973.1 Strain : Clostridium difficile 630 Genome accession: NC_009089 Putative virulence/resistance : Unknown Product : replication initiation factor Function : - COG functional category : L : Replication, recombination and repair COG ID : COG2946 EC number : - Position : 588010 - 589218 bp Length : 1209 bp Strand : + Note : Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; PubMedId : 12568329, 12568327,20528466, 17949300,17650959, 17261630, 16788196,16565159, 11320127, 11157942,11073898, 10850994,10436923, DNA sequence : TTGATTGGAGGAATTTCACTGAATGAACAAACTTGGGTACAGCATTTAAAGGAAAAACGCTTATCTTATGGACTTTCTCA AAACCGACTGGCTATTGCTACAGGCATTACAAGGCAATATCTTAGCGACATTGAAACTGGCAAGGTCAAGCCATCAGACG AATTACAACTGGCACTTTTAGAAACGCTGGAACGCTTCAATCCCGACGCTCCCCTTGAAATGCTCTTTGACTATGTAAGG ATTCGGTTTCCAACAACAGACGTACAGCATGTGGTCGAGGACGTTTTACGATTGAAACTTTCCTATATGCTCCATGAAGA CTATGGCTTCTATTCCTATACCGAACATTATGCTTTAGGCAATATTTTCGTCCTATGCTCTCATGAGCTGGATAAAGGGG TTCTAGTGGAATTGAAAGGTCGTGGGTGCAGACAATTTGAAAGCTATCTCTTAGCACAACAAAGAAGCTGGTATGAGTTC TTTATGGACGCTTTGGTGGCTAGTGGCGTGATGAAACGCCTTGACCTTGCCATCAACGATAAAACAGGGATTTTGAATAT TCCCATACTGACGGAAAAATGCCGACAGGAAGAGTGTATTTCGGTGTTCCGCAGTTTCAAGAGCTATCGCAGTGGCGAAC TGGTACGCAAAGATGAAAAGGAATGTATGGGAAACACACTTTATATCGGTTCATTACAAAGCGAAGTCTATTTCTGTATC TATGAAAAGGACTATGAGCAGTACAAGAAAAATGATATTCCCATTGAAGACGCAGAGGTTAAAAACCGTTTTGAAATCCG ACTAAAAAATGAGCGTGCCTATTATGCAGTACGTGATTTACTTGCCTATGATAATCCAGAGCATACAGCTTTTAAGATTA TCAATCGGTATATCCGCTTTGTGGATAAGGACGATTCAAAAGCACGTTCCGATTGGAAACTCAATGAAGAATGGGCATGG TTTATTGGAAACAATCGTGAACGATTAAAACTAACCACAAAACCAGAGCCTTACTCTTTCCAAAGGACACTAAACTGGCT ATCTCATCAAGTCGCCCCGACCTTAAAGGTTGCTATTACACTTGATGAAATTAACCAGACGCAGGTTGTGAAAGACATTC TCGACCATGCGAAACTGACAGACCGACACAAGCAGATTTTAAAGCAACAGTCGGTAAAAGAACAGGACGTGATAACGAAC AAAAAATAA Protein sequence : MIGGISLNEQTWVQHLKEKRLSYGLSQNRLAIATGITRQYLSDIETGKVKPSDELQLALLETLERFNPDAPLEMLFDYVR IRFPTTDVQHVVEDVLRLKLSYMLHEDYGFYSYTEHYALGNIFVLCSHELDKGVLVELKGRGCRQFESYLLAQQRSWYEF FMDALVASGVMKRLDLAINDKTGILNIPILTEKCRQEECISVFRSFKSYRSGELVRKDEKECMGNTLYIGSLQSEVYFCI YEKDYEQYKKNDIPIEDAEVKNRFEIRLKNERAYYAVRDLLAYDNPEHTAFKIINRYIRFVDKDDSKARSDWKLNEEWAW FIGNNRERLKLTTKPEPYSFQRTLNWLSHQVAPTLKVAITLDEINQTQVVKDILDHAKLTDRHKQILKQQSVKEQDVITN KK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SSU05_0930 | YP_001198296.1 | Tn916, transcriptional regulator | Not tested | 89K | Protein | 9e-179 | 93 |
| SSU98_0936 | YP_001200494.1 | Tn916, transcriptional regulator | Not tested | 89K | Protein | 9e-179 | 93 |
