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Name : CD630_04860 (CD630_04860) Accession : YP_001086960.1 Strain : Clostridium difficile 630 Genome accession: NC_009089 Putative virulence/resistance : Resistance Product : two-component response regulator Function : - COG functional category : T : Signal transduction mechanisms COG ID : COG0745 EC number : - Position : 576313 - 576987 bp Length : 675 bp Strand : - Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 18689481, 18790863; Product type r : regulator DNA sequence : ATGAACAATAAAATACTCGTCGTAGATGATGAGGAAGGTATAATAACACTCTTAAAAGATTACTTTGAAATGAATGGTTA TGAGGTTTACACTGCTCAAAGTGGAAAAGACGCATTAAAAAAAATATCCAAAAATCCAGATATCATTCTACTTGATATAA ACATGCCTGAAATAGATGGAATTGAAGTTTGTAATAGAATTAGAGATTATATATCATGCCCTATTCTATTTCTTACAGCT AGAATTGAAAATACTGACAAGATAAATGGTTTTCGTGCTGGTGCTGATGATTATATTGTAAAACCTTTTGATTTAGACGA ACTTGGAGCTAGAGTATCTGCCCATTTAAGACGTGAACAAAGGAAGTCAAATCAAACTAAAATTAAATTTTATAATGATT TAACAATAGATTACGAAAAAAGGTTAATTTGTATATATAATAATCAGATTTCACTTTCAAAAAAGGAATTTGATATAGTA GAGCTTCTCTCTATGAATCCTGGACAGGTATTTGATAAAGAAAAAATATATGATAGAGTCTGGGGATACAATAGCAATGG AAATAGTGATGTTATAATGGAACACATTAGAAAAATACGAATCAAACTATCAAAACATACTCTTGAAAATTATATAGAAA CAGTCTGGGGAGTTGGTTATAAATGGATAAAATAA Protein sequence : MNNKILVVDDEEGIITLLKDYFEMNGYEVYTAQSGKDALKKISKNPDIILLDINMPEIDGIEVCNRIRDYISCPILFLTA RIENTDKINGFRAGADDYIVKPFDLDELGARVSAHLRREQRKSNQTKIKFYNDLTIDYEKRLICIYNNQISLSKKEFDIV ELLSMNPGQVFDKEKIYDRVWGYNSNGNSDVIMEHIRKIRIKLSKHTLENYIETVWGVGYKWIK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| nisR2 | YP_006309922.1 | NisR | Not tested | FWisland_1 | Protein | 4e-29 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| CD630_04860 | YP_001086960.1 | two-component response regulator | AF155139.2.orf0.gene | Protein | 3e-38 | 42 |
| CD630_04860 | YP_001086960.1 | two-component response regulator | NC_002951.3238224.p0 | Protein | 4e-31 | 41 |
| CD630_04860 | YP_001086960.1 | two-component response regulator | NC_007793.3914065.p0 | Protein | 4e-31 | 41 |
| CD630_04860 | YP_001086960.1 | two-component response regulator | NC_002758.1121390.p0 | Protein | 4e-31 | 41 |
| CD630_04860 | YP_001086960.1 | two-component response regulator | NC_010079.5776364.p0 | Protein | 4e-31 | 41 |
| CD630_04860 | YP_001086960.1 | two-component response regulator | NC_002952.2859858.p0 | Protein | 4e-31 | 41 |
| CD630_04860 | YP_001086960.1 | two-component response regulator | NC_007622.3794948.p0 | Protein | 4e-31 | 41 |
| CD630_04860 | YP_001086960.1 | two-component response regulator | NC_003923.1003417.p0 | Protein | 4e-31 | 41 |
| CD630_04860 | YP_001086960.1 | two-component response regulator | NC_013450.8614146.p0 | Protein | 4e-31 | 41 |
| CD630_04860 | YP_001086960.1 | two-component response regulator | NC_002951.3237708.p0 | Protein | 5e-30 | 41 |
| CD630_04860 | YP_001086960.1 | two-component response regulator | NC_002758.1121668.p0 | Protein | 5e-30 | 41 |
| CD630_04860 | YP_001086960.1 | two-component response regulator | NC_009641.5332272.p0 | Protein | 5e-30 | 41 |
| CD630_04860 | YP_001086960.1 | two-component response regulator | NC_013450.8614421.p0 | Protein | 5e-30 | 41 |
| CD630_04860 | YP_001086960.1 | two-component response regulator | NC_007793.3914279.p0 | Protein | 5e-30 | 41 |
| CD630_04860 | YP_001086960.1 | two-component response regulator | NC_002745.1124361.p0 | Protein | 5e-30 | 41 |
| CD630_04860 | YP_001086960.1 | two-component response regulator | NC_009782.5559369.p0 | Protein | 5e-30 | 41 |
