Gene Information

Name : CD630_04840 (CD630_04840)
Accession : YP_001086958.1
Strain : Clostridium difficile 630
Genome accession: NC_009089
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : 3.6.3.-
Position : 574322 - 574990 bp
Length : 669 bp
Strand : -
Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 17135193, 11781802, 18504552, 18952792,8384683; Product type t : transporter

DNA sequence : 
ATGATTATAAAAGCAAAACAATTATCAAAAATATATGGTTCTAATAACAATAAAGTTATCGCACTTAATAATGTAAATTT
AGAAATAAACTCAGGTGAATTTGTTTCTGTAATTGGACCTTCTGGAAGTGGAAAAAGCACACTTTTACATATTTTAAGTG
GATTAGATAATCCTACCTCTGGACAAGTGTTACTTGATGATAAAGATATATATAAACACACTGAAAAAGAACTATCCGCA
CTTAGAAGAAAATCCTTTGGATTCGTCTTTCAACAATTTAATCTTTTACCTGTTCTTACAGCATCTGAAAATATTTCAAT
GCCTGTACTTCTAGATAAAAAACAACCTGATAAAGGCTATTTAAATGAAATTTCATCATTACTTGGAATTGCAGATAGAC
TCAATCATCTTCCCCATGAACTTTCAGGAGGTCAGCAACAAAGAGTTGCAATTGCTAGAGCACTTATTGCAAAACCAGAT
ATAATATTTGCTGATGAGCCTACAGGAAACTTGGACAGTAAAAGTGGCAGTGAAGTTATGAATCTTCTTATAAAAACTTC
AAAACAGTTTGGAAAGACTTTAGTGGTAATTACTCATGATGATAGAATTGCAAAACTTGCTGATAGAAAAATTTCAATTA
TTGATGGTGTTCTTATGGAGGTGAAATAG

Protein sequence : 
MIIKAKQLSKIYGSNNNKVIALNNVNLEINSGEFVSVIGPSGSGKSTLLHILSGLDNPTSGQVLLDDKDIYKHTEKELSA
LRRKSFGFVFQQFNLLPVLTASENISMPVLLDKKQPDKGYLNEISSLLGIADRLNHLPHELSGGQQQRVAIARALIAKPD
IIFADEPTGNLDSKSGSEVMNLLIKTSKQFGKTLVVITHDDRIAKLADRKISIIDGVLMEVK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-35 47
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-35 46
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-35 46
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-35 46
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 8e-27 43
unnamed AAP55232.1 unknown Not tested SaPIbov2 Protein 1e-30 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CD630_04840 YP_001086958.1 ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 5e-52 55
CD630_04840 YP_001086958.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 6e-51 50
CD630_04840 YP_001086958.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 2e-40 47
CD630_04840 YP_001086958.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 4e-33 47
CD630_04840 YP_001086958.1 ABC transporter ATP-binding protein NC_012469.1.7685735. Protein 4e-32 41