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Name : CD630_04180 (CD630_04180) Accession : YP_001086885.1 Strain : Clostridium difficile 630 Genome accession: NC_009089 Putative virulence/resistance : Virulence Product : conjugative transposon protein Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG3451 EC number : - Position : 487054 - 489447 bp Length : 2394 bp Strand : + Note : Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; PubMedId : 12568329, 12568327,17650959, 11157942,11073898, 8863741; Product type h : extrachromosomal origin DNA sequence : ATGCAAAACGAAAAGGCATTGAGAAGTCAAAAGCGGGACTTAAAGAAAAGTAATTGCAAGTCAAAAAAAGATAAGGGAGG AATCCTTGACCTTATCTTTAAGAAAGAACCGAAAAGATATACGGTAGAAGATACCATTCCCTATCTAAGGCTTTTAAAAA GCGGAATATGCCAGCTTGATGAAAAGCACTTCAGTAAAAGTATAGCCTTTCAGGACATTAACTATCAGCTTGCCTTAGAT GAAGATAGGGACTTGATTTTTAATCAATTTGCAAACTTCCTAAACTCTTTTGATCCAAGTATCAGCATTGAGTTTTCATA TGTCAATCAGCTCGGACGAAACGAAGAAATGAAGTCGGCAATTCAGATACCGGATAAAAAGGACGGTTTTGACGATATAC GCTTTGAATTTAGAGAGATGCTTAAAAGCCAGATTGTAAAGGGAAATAACGGACTTAAAAAATCAAAGTATGTAACCTTT ACAGTGGAAGCGGATAATTTAGAGCAGGCAACATCAAAACTTGAAAGACTGGAGATAGATATATTATCTAATCTAAAGAG CATGGGTGTGAGAGCAGAAAGCCTAAACGGAGAAGAAAGGCTAAAGATACTTCATGATGTTTTAAATCCAAATAAAACAT TTGAATTTTCCTACAAAGACCTAAAGAAAAGAGAAAGCACAAAGACATATATTGTGCCTGATGAGTTTAACTTTACACCG AGTAGATACTTTAAGTTCGGCAAATTCATCGGAGCAACAAGTCATTTTCAAATCCTTGCCAGTGAGCTTTCAGATAGGAT GTTATCCGAGTTTTTGGATATTGACGATAACATCAATATTTCCTTTCATATTAGGGCAATCGACCAATCGGAAGCCATTA AGATGGTAAAACGAAAAAACACTGATATTGATAAGATGAAGATTGAGGAAAATAAGAAGGCGGTAAGAAGCGGTTATGAT ATGGACATTCTTCCATCAGACTTAATTACCTATGGTGAGGATGTAAAGAGCCTTTTAAAAGACTTGCAGACAAGAGATGA GCGAATGTTTGTGGTAAGTATCGTCTTTATGAACTTTGCAAGGACAGTGCAAAAGCTCGATAACACAATTGCTCAAATAA GCTCCATTGCAAATAAGCATAACTGTAAGCTGAAAAGACTTGACCATTCTCAGGAACAAGGTTTAGTGAGCATGCTGCCT CTTGGTGTAAATAAGATTGAGATAGATAGAGGACTGACAAGCTCATCAACGGCAGTATTTATGCCATTTACCACAGAGGA GCTTTTTATCAATTCAAGTAATAGTCTTTACTACGGACTAAATGCCCTAAGCCATAACCTGATTATGGCAGATAGAAAGA AATTAAAGAACCCAAACGGTCTAATCCTCGGAACTCCGGGCAGCGGTAAATCCTTTAGTGCCAAAAGAGAAATGGCAAAT GCGATTTTAGTAACAGATGATGATGTGATTATCTGCGATCCGGAAGGAGAGTATGGAAATCTCGTAAGGCAGTTTAAGGG AGAAGTCATTAAGGTCAGCAGTAAGTCAAAGGATTACCTGAATCCCCTTGATATAAACATGAACTACGGTGATGGGGATG CACCGCTGAAAGACAAGGCAAACTTTATCATGAGTATGCTTGAGCTTGTAGTAGGTGGTAGTGGTCTTACAGCAGAAGAA AAGTCCGTTATAGATAGGTGCCTTCCTAAAATCTATGAAAAGTATTTTGAACATCCTACTCCTGACAATATGCCGATACT TCAAGACCTATACGATATGTTAAAAGGGCAGGAAGAAAAGGTCGGTAAGAAGCTGGCAACAGAGATGGAAATCTATGTAT CGGGTTCTCTCAATGTCTTTAATCACAGGTCAAATGTGGATTTAAATAAGAAGCTGCTTTGTTTTGATATTAAGGAGCTT GGAAGTCAGCTAAAGAAAATAGGAATGCTTGTCATTCAGGATCAGGTGTGGAATAAGGTGTCACAAAACAGGGGAAACAA GGCTACAAGATACTATATCGACGAATTTCACCTGCTGTTAAAAGATGAGCAGACAGCTTCATACTCGGTTGAGATATGGA AGAGGTTTAGAAAATGGGGAGGTATCCCGACAGGTATCACGCAAAATGTCAAAGACCTACTTATGAGTAAGGAGATAGAA AATATTTTTGATAATACGGACTTTGTCTTAATGTTAAATCAGGCTTCGGGAGATAGAGAAATCTTAGCAAGGAAACTTAA AATCTCACTTCCACAGCTCAGATATGTTACTAATTCAAATGAAGGTGAGGGACTACTTTTCTTTGGAAATACCATTGTGC CTTTCCTTGATAAGTTTCCGAAAGATACGATTCTTTATCAGAAGATGACTACCAAGCCGGAAGAAGTGAGGTAG Protein sequence : MQNEKALRSQKRDLKKSNCKSKKDKGGILDLIFKKEPKRYTVEDTIPYLRLLKSGICQLDEKHFSKSIAFQDINYQLALD EDRDLIFNQFANFLNSFDPSISIEFSYVNQLGRNEEMKSAIQIPDKKDGFDDIRFEFREMLKSQIVKGNNGLKKSKYVTF TVEADNLEQATSKLERLEIDILSNLKSMGVRAESLNGEERLKILHDVLNPNKTFEFSYKDLKKRESTKTYIVPDEFNFTP SRYFKFGKFIGATSHFQILASELSDRMLSEFLDIDDNINISFHIRAIDQSEAIKMVKRKNTDIDKMKIEENKKAVRSGYD MDILPSDLITYGEDVKSLLKDLQTRDERMFVVSIVFMNFARTVQKLDNTIAQISSIANKHNCKLKRLDHSQEQGLVSMLP LGVNKIEIDRGLTSSSTAVFMPFTTEELFINSSNSLYYGLNALSHNLIMADRKKLKNPNGLILGTPGSGKSFSAKREMAN AILVTDDDVIICDPEGEYGNLVRQFKGEVIKVSSKSKDYLNPLDINMNYGDGDAPLKDKANFIMSMLELVVGGSGLTAEE KSVIDRCLPKIYEKYFEHPTPDNMPILQDLYDMLKGQEEKVGKKLATEMEIYVSGSLNVFNHRSNVDLNKKLLCFDIKEL GSQLKKIGMLVIQDQVWNKVSQNRGNKATRYYIDEFHLLLKDEQTASYSVEIWKRFRKWGGIPTGITQNVKDLLMSKEIE NIFDNTDFVLMLNQASGDREILARKLKISLPQLRYVTNSNEGEGLLFFGNTIVPFLDKFPKDTILYQKMTTKPEEVR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| EF2320 | NP_815976.1 | traE protein | Not tested | Not named | Protein | 0.0 | 59 |
| EFAU085_00716 | YP_008394240.1 | Type IV secretory pathway, VirB4 component | Virulence | Not named | Protein | 0.0 | 52 |
