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Name : CD630_04120 (CD630_04120) Accession : YP_001086878.1 Strain : Clostridium difficile 630 Genome accession: NC_009089 Putative virulence/resistance : Unknown Product : conjugative transfer protein Tn1549-like, CTn2-Orf5 Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG3505 EC number : - Position : 483072 - 484856 bp Length : 1785 bp Strand : + Note : Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; PubMedId : 12568329, 12568327,17650959, 11157942,11073898, 8863741; Product type pf : putative factor DNA sequence : ATGATAGATAAGATATTAAAGGACATCAAAGGCTTATTTAAGGTGCAAGATAAGGTAAAGTTTCTAAAGCAGAACATTCC CTATCTTGCATTTTTCTATATAGGCGATATCTTTTCACATCATGTAAGAGTCTATGTAGGTGGCGATATTATTGACAAAA TCTTTCAAGGGATATTAGAGATTAACACTATGAACTTTCTTCCAAGCATTCATCCTACGGATATTTTAATGGGAGTGTTA GTAGCTGTTTTAATCAAATTTATCGTATATACCAAAGGGAAAAATGCTAAAAAGTTTAGACAGGGGAAAGAGTATGGCTC AGCAAGATGGGGAAATAAAAAAGACATCGAGCCGTACATGGATGAAAAGTTTCAAAACAATATCTTGCTCACTCAAACAG AACGATTAACTATGAACGGTAGACCTGCTAATCCAAAGTATGCAAGAAATAAGAATGTACTTGTCATAGGAGGATCAGGA AGTGGCAAGACTCGATTTTTTGTAAAACCAAACCTTATGCAAATGCACAGCAGCTATTGTGTAACCGATCCAAAAGGAAC GATAGTTCTTGAGTGTGGTAAAATGCTTGAAGATAACGGATATGAGATAAAAATCTTAAATACCATCAACTTCAAAAAGA GTATGAAATACAATCCATTTGCCTATATTCGTTCTGAGAAAGATATATTAAAACTTGTTCAGACCATCATTGCAAACACC AAGGGCGAGGGAGAAAAAGCAGGTGAAGATTTTTGGGTAAAAGCCGAAAAACTCTACTATACAGCACTTATCGGCTATAT CTTCTATGAAGCTCCAAGAGAAGAAAAGAACTTTGCAACCCTTCTTGATATGATAGACGCTTCGGAAGTCAGAGAAGATG ATGAAACCTATATGAATCCGATTGATAGACTCTTTGAAGCATTGGAAAAGAAAGAGCCTACACACTTTGCGGTGAAGCAA TATAAAAAGTACAAGCTGGCAGCCGGAAAAACTGCCAAATCGATTCTTATAAGCTGTGGTGCAAGGCTTGCTCCCTTTGA TATTCAGGAACTTAGGGACTTGATGCAAGAAGATGAACTGGAGCTTGATACTCTTGGAGATAGAAAGACTGCCCTCTTTG TTATTATCTCTGATACAGATGATACCTTTAACTTTGTAGTATCTATTATGTACTCTCAGTTATTTAATCTTTTATGTGAT AAAGCGGATGATGTGTATGGCGGAAGATTACCTATCCATGTGAGATGCTTACTTGATGAATTTGCAAACATTGGTTTAAT ACCTAAGTTTGAGAAGTTAATTGCAACAATCCGTTCCAGAGAAATATCAGCAAGCATCATACTTCAAGCACAATCTCAGC TAAAGGTAATCTATAAGGATAATGCCGATACAATCGTAGGTAACTGTGATAGTACCTTGTTTCTTGGTGGCAAGGAAAAG ACCACATTAAAGGAACTTTCTGAAACACTGGGAAAAGAAACGATAGATTTATATAACACATCGGAAACAAGGAGTAATCA AAAGAGCTTTGGACTTAATTACCAAAAGACAGGTAAGGAGCTTATGAGCCAAGATGAGATTACTGTAATGGACGGTAGCA AATGTATCTTTCAGCTTAGAGGTGTCAGACCTTTTCTTTCAGATAAATTCGATATTACAAAGCACAAGAATTATAAGCTA CTTGAAGATTATGATAAGAAGAATGTGTTTAATATTGAGAGCTATATGAAGCGAAAAGGAAAAGCAAAATTAAATAGAGA AACGGTTATTACAAGAATGCAGTAA Protein sequence : MIDKILKDIKGLFKVQDKVKFLKQNIPYLAFFYIGDIFSHHVRVYVGGDIIDKIFQGILEINTMNFLPSIHPTDILMGVL VAVLIKFIVYTKGKNAKKFRQGKEYGSARWGNKKDIEPYMDEKFQNNILLTQTERLTMNGRPANPKYARNKNVLVIGGSG SGKTRFFVKPNLMQMHSSYCVTDPKGTIVLECGKMLEDNGYEIKILNTINFKKSMKYNPFAYIRSEKDILKLVQTIIANT KGEGEKAGEDFWVKAEKLYYTALIGYIFYEAPREEKNFATLLDMIDASEVREDDETYMNPIDRLFEALEKKEPTHFAVKQ YKKYKLAAGKTAKSILISCGARLAPFDIQELRDLMQEDELELDTLGDRKTALFVIISDTDDTFNFVVSIMYSQLFNLLCD KADDVYGGRLPIHVRCLLDEFANIGLIPKFEKLIATIRSREISASIILQAQSQLKVIYKDNADTIVGNCDSTLFLGGKEK TTLKELSETLGKETIDLYNTSETRSNQKSFGLNYQKTGKELMSQDEITVMDGSKCIFQLRGVRPFLSDKFDITKHKNYKL LEDYDKKNVFNIESYMKRKGKAKLNRETVITRMQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| EFAU085_00690 | YP_008394214.1 | TraG/TraD family protein | Not tested | Not named | Protein | 2e-142 | 69 |
| EF2328 | NP_815983.1 | TraG family protein | Not tested | Not named | Protein | 2e-174 | 65 |
