Gene Information

Name : CD630_03810 (CD630_03810)
Accession : YP_001086847.1
Strain : Clostridium difficile 630
Genome accession: NC_009089
Putative virulence/resistance : Unknown
Product : replication initiation factor
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2946
EC number : -
Position : 449360 - 450472 bp
Length : 1113 bp
Strand : -
Note : Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; PubMedId : 12568329, 12568327,17650959, 11157942,11073898, 8863741; Product type pf : putative factor

DNA sequence :
ATGGCTGGTATCAGCCGTGAACATTTAAGCCGTATCGAAGCAGGAAAAGTAACGCTTACCGAGGATATGAAACACAAGCT
CTTAGAAGCGGTGGAAAAATTCAATCCTGACAATCCTATGTTCCTGCTGTTTGATTATGTGCGTATCCGTTTTCCCACAA
CGGATATTCAGCATATCATCAAGGACATCTTAAAGCTAAATATCAATTATATGCTCCATGAAGATTACGGGCATTACAAA
TATACGGAACATTACCATATCGGCGAGGTATTCGTGTATGTGTCGCAGGACGAGGAAAAAGGTGTCCTGCTGGAACTGAA
AGGCAAGGGCTGTCGCCAGTTTGAAAGTTACCTGCTGGCACAGGAACGGAGCTGGTATGATTTTTTCATGGACGCTTTGG
TTGAGGGTGGCGTGATGAAGCGGATTGATTTGGCAATCAATGACAGAACGGGCTTGCTGGATATTCCAGAGCTGATACAA
AAATGTGAAAATGAAGAATGTATTTCAAAATTCCGCTCTTTCAAAAACTATGGCTCTGGGGAACTGGTAAAGCACAACGA
AACCGACAAAGGCGGTATGGGGCATACACTGTATATCGGTTCATTTTCGAGTGAAGTGTACTTCTGCTGTTATGAAAAGA
ACTATGAACAGTACGCAAAGCTGGGAATACCCATTGAGGAAGTCCCTATCAAAAACAGATTTGAGATACGCTTAAAAAAT
GAGCGTGCTTACTATGCGGTACGGGAACTGCTGACGAATTATGACGCAGAGCTGACCGCATTTTCCATTATCAACCAGTA
TATCCGCTTCGCCGATAAAGAGCCAGACAAGCGAAAAAGCGACTGGAAAACCAACGCCCGCTGGTCTTGGTTCATTGGCG
AGGGGCGACCGCCCATAAAGCTGACAACAAAGCCAGAGCCTTTCACAATGGAGCGTACAATGAAATGGCTACAAAGGCAG
GTTGCCCCTACCTTAAAAATGATGAAAAAGATTGATAAGGGAAACGGTACAGACTACATGGAAACAATCGAACAGCAGGC
AAAGCTCACAGAAAAACATGAAATGATAATCAAACAGCAGACGACCCCTGCAAAAGATTTGGTGGAAAGTTAG

Protein sequence :
MAGISREHLSRIEAGKVTLTEDMKHKLLEAVEKFNPDNPMFLLFDYVRIRFPTTDIQHIIKDILKLNINYMLHEDYGHYK
YTEHYHIGEVFVYVSQDEEKGVLLELKGKGCRQFESYLLAQERSWYDFFMDALVEGGVMKRIDLAINDRTGLLDIPELIQ
KCENEECISKFRSFKNYGSGELVKHNETDKGGMGHTLYIGSFSSEVYFCCYEKNYEQYAKLGIPIEEVPIKNRFEIRLKN
ERAYYAVRELLTNYDAELTAFSIINQYIRFADKEPDKRKSDWKTNARWSWFIGEGRPPIKLTTKPEPFTMERTMKWLQRQ
VAPTLKMMKKIDKGNGTDYMETIEQQAKLTEKHEMIIKQQTTPAKDLVES

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSU05_0930 YP_001198296.1 Tn916, transcriptional regulator Not tested 89K Protein 3e-118 62
SSU98_0936 YP_001200494.1 Tn916, transcriptional regulator Not tested 89K Protein 3e-118 62