Gene Information

Name : CD630_03660 (CD630_03660)
Accession : YP_001086833.1
Strain : Clostridium difficile 630
Genome accession: NC_009089
Putative virulence/resistance : Resistance
Product : ABC transporter multidrug-family ATP-binding protein Tn916-like, CTn1-Orf11
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1131
EC number : 3.6.3.-
Position : 437439 - 438365 bp
Length : 927 bp
Strand : -
Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 12568329, 12568327, 17650959, 11157942,11073898, 8863741,17135193, 11781802, 18504552,18952792, 8384683; Product type t : transporter

DNA sequence :
ATGGATAATCAAATTATTCTTGCTACAAAACAACTGACTAAAAAATATGGAGATGTTACGGCGGTTGAGAAAATAAACTT
AAATGTCAAAAAAGGTCGTATATATGGATTGCTGGGAAGAAATGGTGCTGGTAAGACTACTATAATGAAAATGGTTCTTG
GACTTATTTCTATTTCTTCTGGAGAAGTAGAAATTTTCGGAAAGCAGTTAAAAGGAAATGAAAAAGATGTTTACACAAGA
ATAGGTTCTATTATAGAAACGCCCAGTTTTTATTCTTATTTAACGGGAACTGAAAATTTAGAAATATTTTCAAGATTAAG
AGGTACAATCAAAAAGAATGCTGTAAAAAGTGCTTTAGAAGTGGTTGGACTACCTTATAAAGATAAGAAACCATTTTCTT
CTTATTCGTTAGGAATGAAACAACGGCTAGGAATTGCAAATGCTATTTTGAATGACCCTGAAATTTTAATATTAGACGAG
CCAACAAATGGACTTGATCCAGTAGGAATAGTTGAAATCAGAAAATTTTTGCAGTCATTGTGTCATGAACAAGGAAAAAC
TATTATTATTTCAAGTCATATTTTGTCTGAAATTTCTTTGCTTGCTGATGATATAGGAATAATACACGACGGTCATTTAT
TGAAAGAAATTTCTATGAATGAACTGGAAGAAAAAAATAAAAAGTATATTGAAATTAAAGTGAATAATGTTCCTATGGCT
ACGCAATTATTAGAAAATGTAATGAAATGTAAAAACTATTCTGTTACAGATAAAACCTGTATTGAAATATACGATGAAGC
TTTAGACACAGAAGAAATAGCAAATTGCATGGTTTCGCATGGAGTAGGCTTATCATCACTGTATTTTAAGCACGAAACAT
TAGAAGATTATTTTACTTCATTGACTGGGGGTGCAAAATTTGAATAA

Protein sequence :
MDNQIILATKQLTKKYGDVTAVEKINLNVKKGRIYGLLGRNGAGKTTIMKMVLGLISISSGEVEIFGKQLKGNEKDVYTR
IGSIIETPSFYSYLTGTENLEIFSRLRGTIKKNAVKSALEVVGLPYKDKKPFSSYSLGMKQRLGIANAILNDPEILILDE
PTNGLDPVGIVEIRKFLQSLCHEQGKTIIISSHILSEISLLADDIGIIHDGHLLKEISMNELEEKNKKYIEIKVNNVPMA
TQLLENVMKCKNYSVTDKTCIEIYDEALDTEEIANCMVSHGVGLSSLYFKHETLEDYFTSLTGGAKFE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sboF YP_006309913.1 SboF Not tested FWisland_1 Protein 8e-39 48
cdd4 CAA63569.1 - Not tested PaLoc Protein 1e-41 46
SSU98_0954 YP_001200512.1 hypothetical protein Not tested 89K Protein 3e-35 41
SSU05_0946 YP_001198312.1 hypothetical protein Not tested 89K Protein 3e-35 41