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Name : CD630_03590 (CD630_03590) Accession : YP_001086826.1 Strain : Clostridium difficile 630 Genome accession: NC_009089 Putative virulence/resistance : Unknown Product : RNA polymerase sigma factor Tn916-like,CTn1-Orf4 Function : - COG functional category : K : Transcription COG ID : COG1191 EC number : - Position : 430953 - 431381 bp Length : 429 bp Strand : - Note : Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; PubMedId : 12568329, 12568327,17650959, 11157942,11073898, 8863741; Product type pf : putative factor DNA sequence : GTGAGATTGATGAAACCGTCTGACTTCCAGAAAACAGTTCAATGTCGTTTTGAAAGTTGTTTAAAGAAAGTTGTTCGTAG TGTCGTGAAAGATTATTACAAGGAATTAAACCGTCGTAAGAATAAAGAAATATCTTTCAGCGAATTGCCAGATGTCCTTG TTGATAAAATGGCTGTTTGGGACGACTACGAAACAGATTATACAATCTTTTCAGTATGTGGCATTGATATTCGTGTCCTT GATGATGAATTGGCAGAAGCCTTGAAGAAACTTCCAGAAAGAAAACGCAATACTCTGTTGATGTATTACTTCTTGGAAAT GACAGAAAGTGAAATTGCCAACTTGCAGAAAATCACGCAAAGCGGTGTATTTAGAAACCGACATCACGCTTTGGAAACTA TGAAAAAAATACTCAAGGAGGAACATTAG Protein sequence : MRLMKPSDFQKTVQCRFESCLKKVVRSVVKDYYKELNRRKNKEISFSELPDVLVDKMAVWDDYETDYTIFSVCGIDIRVL DDELAEALKKLPERKRNTLLMYYFLEMTESEIANLQKITQSGVFRNRHHALETMKKILKEEH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SSU05_0919 | YP_001198285.1 | hypothetical protein | Not tested | 89K | Protein | 8e-26 | 43 |
| SSU98_0925 | YP_001200483.1 | hypothetical protein | Not tested | 89K | Protein | 8e-26 | 43 |
